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authorPjotr Prins2019-09-05 00:27:07 -0500
committerPjotr Prins2019-09-05 00:27:07 -0500
commit90585724d8fb4a7d2ef4ec926351e0d108e1982f (patch)
treee837da587728460aaef4d067231dff838ccc4412 /gn/packages/ruby.scm
parenta5a1e75c1379d9c26c0a0f9dbb9fb069c7bf7f18 (diff)
parentbf30a28e423fc156e8cbd8553e306ae99f46618a (diff)
downloadguix-bioinformatics-90585724d8fb4a7d2ef4ec926351e0d108e1982f.tar.gz
Merge branch 'master' of gitlab.com:genenetwork/guix-bioinformatics
Diffstat (limited to 'gn/packages/ruby.scm')
-rw-r--r--gn/packages/ruby.scm47
1 files changed, 0 insertions, 47 deletions
diff --git a/gn/packages/ruby.scm b/gn/packages/ruby.scm
index e46616c..8dfb1d2 100644
--- a/gn/packages/ruby.scm
+++ b/gn/packages/ruby.scm
@@ -292,53 +292,6 @@ a history.")
"https://github.com/pjotrp/bioruby-logger-plugin")
(license #f)))
-(define-public bio-table ; guix maybe ready
-(package
- (name "bio-table")
- (version "1.0.0")
- (source
- (origin
- (method url-fetch)
- (uri (rubygems-uri "bio-table" version))
- (sha256
- (base32
- "1jlpls734kd41rffn2y2747nr14k5rwgaj2g3k48i9xgsfcmrn6r"))))
- (build-system ruby-build-system)
- (propagated-inputs
- `(("ruby-bio-logger" ,ruby-bio-logger)))
- (arguments
- `(#:tests? #f)) ;; no bundler
- (synopsis
- "Functions and tools for tranforming and changing tab delimited and comma separated table files - useful for Excel sheets and SQL/RDF output")
- (description
- "Functions and tools for tranforming and changing tab delimited and comma separated table files - useful for Excel sheets and SQL/RDF output")
- (home-page
- "http://github.com/pjotrp/bioruby-table")
- (license license:expat)))
-
-
-(define-public bio-vcf ; guix maybe ready
-(package
- (name "bio-vcf")
- (version "0.9.2")
- (source
- (origin
- (method url-fetch)
- (uri (rubygems-uri "bio-vcf" version))
- (sha256
- (base32
- "1007bn0w8l11q867lxsyqnk0vgvv12skvk9gyglv7g44knr5vh4j"))))
- (build-system ruby-build-system)
- (arguments
- `(#:tests? #f)) ;; no bundler/cucumber
- (synopsis
- "Smart lazy multi-threaded parser for VCF format with useful filtering and output rewriting (JSON, RDF etc.)")
- (description
- "Smart lazy multi-threaded parser for VCF format with useful filtering and output rewriting (JSON, RDF etc.)")
- (home-page
- "http://github.com/pjotrp/bioruby-vcf")
- (license license:expat)))
-
(define-public ruby-faraday
(package
(name "ruby-faraday")