diff options
| author | Efraim Flashner | 2020-08-14 05:50:38 -0500 |
|---|---|---|
| committer | Efraim Flashner | 2020-08-14 05:50:58 -0500 |
| commit | 9b240e29cd276bd4989a7a20117132df3c290d9c (patch) | |
| tree | 871c106a2bf95479fb5f0bb79185c9f0c812b686 /gn/packages/ratspub.scm | |
| parent | b0c38d151324e37448ade758cc48d02d89f94b60 (diff) | |
| download | guix-bioinformatics-9b240e29cd276bd4989a7a20117132df3c290d9c.tar.gz | |
gn: ratspub: Update to 0.4.0.
Diffstat (limited to 'gn/packages/ratspub.scm')
| -rw-r--r-- | gn/packages/ratspub.scm | 21 |
1 files changed, 11 insertions, 10 deletions
diff --git a/gn/packages/ratspub.scm b/gn/packages/ratspub.scm index 6cf4802..912f535 100644 --- a/gn/packages/ratspub.scm +++ b/gn/packages/ratspub.scm @@ -19,16 +19,16 @@ (define-public ratspub (package (name "ratspub") - (version "0.3.2") + (version "0.4.0") (source (origin (method git-fetch) (uri (git-reference - (url "https://github.com/chen42/ratspub.git") + (url "https://github.com/chen42/ratspub") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 (base32 - "17phk83n0p21b90c7saqgmclw71ydmq62da33iq67rzv9psxvs2s")) + "0hasm6xncqkan9s4sw89s1x9gcybw59fzvpmr7fk1camvij7mywh")) (modules '((guix build utils))) (snippet '(begin (substitute* "server.py" @@ -130,13 +130,14 @@ (home-page "http://rats.pub/") (synopsis "Relationship with Addiction Through Searches of PubMed") (description - "RatsPub searches PubMed to find sentences that contain the query terms -(i.e., gene symbols) and drug addiction-related keywords. These gene-keyword -relationships are presented as an interactive graph that can efficiently answer -the question \"What do we know about these genes and addiction?\". Data from -@acronym{EBI GWAS, European Bioinformatics Institute Genome-Wide Association -Studies} catalog are also included in the search to better answer this -question.") + "RatsPub is a tool to efficiently and comprehensively answer the question +\"What do we know about these genes and addiction?\". RatsPub answers this +question by searching PubMed to find sentences containing the query terms (i.e., +gene symbols) and over 300 drug addiction-related keywords that are organized +into six categories. Data from @url{https://www.ebi.ac.uk/gwas/, +@acronym{NHGRI-EBI GWAS, European Bioinformatics Institute Genome-Wide +Association Studies}} catalog are also included in the search. These +gene-keyword relationships are presented as an interactive graph and a table.") (license license:expat))) (define-public ratspub-with-tensorflow-native |