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authorpjotrp2017-08-24 09:18:08 +0000
committerpjotrp2017-08-24 09:18:08 +0000
commitedee34ded00e323231e362fd2a3d33b73949d2ab (patch)
treea10245134cf46c162ccb4b5b6a904909efe62577 /gn/packages/phewas.scm
parent66176c459477b479ac4cf7c9c83bec872e7ea0dc (diff)
parentffc2270004fccd6c0f9456891c99d91526bca1bf (diff)
downloadguix-bioinformatics-edee34ded00e323231e362fd2a3d33b73949d2ab.tar.gz
Conflict
Diffstat (limited to 'gn/packages/phewas.scm')
-rw-r--r--gn/packages/phewas.scm9
1 files changed, 5 insertions, 4 deletions
diff --git a/gn/packages/phewas.scm b/gn/packages/phewas.scm
index 2bd832e..59269ef 100644
--- a/gn/packages/phewas.scm
+++ b/gn/packages/phewas.scm
@@ -19,6 +19,7 @@
#:use-module (gnu packages boost)
#:use-module (gnu packages compression)
#:use-module (gnu packages cpio)
+ #:use-module (gnu packages cran)
#:use-module (gnu packages file)
#:use-module (gnu packages gcc)
#:use-module (gnu packages java)
@@ -117,14 +118,14 @@ genome-wide association studies in structured populations.")
(define-public r-fgsea
(package
(name "r-fgsea")
- (version "1.0.2")
+ (version "1.2.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "fgsea" version))
(sha256
(base32
- "1yq4s4g4xxzcpkv9dpbg29444iy38vfgwj4wgr47rjjq8njfblfx"))))
+ "1vl9i889800avi8valkl0bz9jrjz71anzmal245ls9gwydrv0dpc"))))
(build-system r-build-system)
; (native-inputs
; `(("gfortran" ,gfortran)))
@@ -145,14 +146,14 @@ genome-wide association studies in structured populations.")
(define-public r-qvalue
(package
(name "r-qvalue")
- (version "2.6.0")
+ (version "2.8.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "qvalue" version))
(sha256
(base32
- "1dijh11v1kr29gnikq09pkdvm3qwmp1a406ahx9l4j6mgn8hlsfq"))))
+ "1dxdwa767a9r8n61r272ypi09qblcdfpzzwkmri74y5mbp1r3y4i"))))
(build-system r-build-system)
(propagated-inputs
`(("r-reshape2" ,r-reshape2)