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authorEfraim Flashner2023-06-14 19:49:27 +0300
committerEfraim Flashner2023-06-14 19:49:27 +0300
commit0cc843925d59093b70490ccbca5e18bc4174de9c (patch)
tree581d8dc630bbd8570d70bf204f8055ed82a8c282 /gn/packages/machine-learning.scm
parent1269222c38a87f8162b2c8414b8af1f262ae113f (diff)
downloadguix-bioinformatics-0cc843925d59093b70490ccbca5e18bc4174de9c.tar.gz
gn: genecup: Use correct python-h5py.
* gn/packages/python.scm (python-h5py-2): New variable.
* gn/packages/machine-learning.scm (tensorflow-native): Remove comments.
* gn/packages/ratspub.scm (use-corrected-inputs): New procedure.
(genecup-with-tensorflow-native, genecup-latest-with-tensorflow-native):
Use use-corrected-inputs.
Diffstat (limited to 'gn/packages/machine-learning.scm')
-rw-r--r--gn/packages/machine-learning.scm12
1 files changed, 0 insertions, 12 deletions
diff --git a/gn/packages/machine-learning.scm b/gn/packages/machine-learning.scm
index fbaffb2..8f9f1f0 100644
--- a/gn/packages/machine-learning.scm
+++ b/gn/packages/machine-learning.scm
@@ -11,18 +11,6 @@
     (arguments
      (substitute-keyword-arguments (package-arguments tensorflow)
        ((#:substitutable? _ #f) #f)
-       ;((#:phases phases)
-       ; `(modify-phases ,phases
-       ;    (add-after 'unpack 'hardcode-multicore-usage
-       ;      (lambda _
-       ;        (substitute* "tensorflow/core/protobuf/config.proto"
-       ;          ;(("num_threads = 1") "num_threads = 28") ; 56/2 for penguin2
-       ;          ;(("intra_op_parallelism_threads = 2")
-       ;          ; "intra_op_parallelism_threads = 0")
-       ;          ;(("inter_op_parallelism_threads = 5")
-       ;          ; "inter_op_parallelism_threads = 0")
-       ;          )
-       ;        #t))))
        ((#:configure-flags flags)
         `(cons
            "-Dtensorflow_OPTIMIZE_FOR_NATIVE_ARCH=ON"