diff options
| author | BonfaceKilz | 2021-05-10 16:15:05 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2021-05-10 20:46:17 +0300 |
| commit | 165c48ca7c6c3d1bc5167a2c18f6b01f412da1c4 (patch) | |
| tree | dc9f48eeaf63a82779c51d5bb5cfbd9befee2f4e /gn/packages/genenetwork.scm | |
| parent | e4f4d1281717f3fd2fd724eda1ff8f15f781eba7 (diff) | |
| download | guix-bioinformatics-165c48ca7c6c3d1bc5167a2c18f6b01f412da1c4.tar.gz | |
gn: genenetwork: Add genenetwork3.
* gn/packages/genenetwork.scm (genenetwork3): New variable.
Diffstat (limited to 'gn/packages/genenetwork.scm')
| -rw-r--r-- | gn/packages/genenetwork.scm | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index 49bc7c7..86f2d46 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -417,6 +417,43 @@ Graphical Fragment Assembly} files and related formats.") (description "Genenetwork installation sumo.") (license license:agpl3+)))) +(define-public genenetwork3 + (let ((commit "45f4dc8b2079ce97374785984b6f31049f374fd5")) + (package + (name "genenetwork3") + (version (string-append "0.0.1-guix-" (string-take commit 7))) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/genenetwork/genenetwork3.git") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1jyqf01b16bll8cf6v4562d141d1b64jicdcwm8k2q56vs2k461p")))) + (propagated-inputs `(("coreutils" ,coreutils) + ("gemma-wrapper" ,gemma-wrapper) + ("python" ,python-wrapper) + ("python-bcrypt" ,python-bcrypt) + ("python-flask" ,python-flask) + ("python-ipfshttpclient" ,python-ipfshttpclient) + ("python-mypy" ,python-mypy) + ("python-mypy-extensions" ,python-mypy-extensions) + ("python-mysqlclient" ,python-mysqlclient) + ("python-numpy" ,python-numpy) + ("python-pylint" ,python-pylint) + ("python-redis" ,python-redis) + ("python-requests" ,python-requests) + ("python-scipy" ,python-scipy) + ("python-sqlalchemy-stubs" + ,python-sqlalchemy-stubs))) + (build-system python-build-system) + (home-page "https://github.com/genenetwork/genenetwork3") + (synopsis "GeneNetwork3 API for data science and machine learning.") + (description "GeneNetwork3 API for data science and machine learning.") + (license license:agpl3+)))) + (define-public python3-genenetwork2 (let ((commit "84cbf35adbb15c79638372d108308edb05f12683")) (package |