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| author | pjotrp | 2017-12-27 10:24:27 +0000 |
|---|---|---|
| committer | pjotrp | 2017-12-27 10:24:27 +0000 |
| commit | ed093776afcb33d1601e9390e0458fd0f782fc99 (patch) | |
| tree | c33a41c2d00be6182be59f1bd8432f292734f960 /gn/packages/genenetwork.scm | |
| parent | 9df032aa61bb669faf49fbadaf86d7319bf2801b (diff) | |
| download | guix-bioinformatics-ed093776afcb33d1601e9390e0458fd0f782fc99.tar.gz | |
gemma: provide generic package
Diffstat (limited to 'gn/packages/genenetwork.scm')
| -rw-r--r-- | gn/packages/genenetwork.scm | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index 52d2dce..479f694 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -192,7 +192,7 @@ location of a putative QTL.") ("r-wgcna" ,r-wgcna) ("redis" ,redis) ("mysql" ,mysql) - ("gemma-git-gn2" ,gemma-git-gn2) + ("gemma" ,gemma-gn2-haswell) ("gemma-wrapper" ,gemma-wrapper) ("genenetwork2-files-small" ,genenetwork2-files-small) ("plink-ng-gn" ,plink-ng-gn) @@ -252,7 +252,7 @@ location of a putative QTL.") (datafiles (string-append (assoc-ref inputs "genenetwork2-files-small") "/share/genenetwork2" )) (pylmmcmd (string-append (assoc-ref inputs "pylmm-gn2") "/bin/pylmm_redis")) (plink2cmd (string-append (assoc-ref inputs "plink-ng-gn") "/bin/plink2")) - (gemmacmd (string-append (assoc-ref inputs "gemma-git-gn2") "/bin/gemma")) + (gemmacmd (string-append (assoc-ref inputs "gemma") "/bin/gemma")) ) (substitute* '("etc/default_settings.py") |