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| author | Efraim Flashner | 2020-06-16 12:50:00 +0300 |
|---|---|---|
| committer | Efraim Flashner | 2020-06-16 12:50:00 +0300 |
| commit | 9ca77d2492781ff68bdfd819bb3dfc70ace9e2c1 (patch) | |
| tree | f84f792cf7cd5c1c65e6d09988019e898c5b71b9 /gn/packages/bioinformatics.scm | |
| parent | f4c3abf2b8625e73c8aa945c5be1ee3f4b6715be (diff) | |
| download | guix-bioinformatics-9ca77d2492781ff68bdfd819bb3dfc70ace9e2c1.tar.gz | |
gn: Add rust-gfa.
Diffstat (limited to 'gn/packages/bioinformatics.scm')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index fca21a9..b38016a 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -8,6 +8,7 @@ #:use-module (guix git-download) #:use-module (guix hg-download) #:use-module (guix build-system ant) + #:use-module (guix build-system cargo) #:use-module (guix build-system cmake) #:use-module (guix build-system gnu) #:use-module (guix build-system python) @@ -22,6 +23,7 @@ #:use-module (gnu packages check) #:use-module (gnu packages compression) #:use-module (gnu packages cran) + #:use-module (gnu packages crates-io) #:use-module (gnu packages datastructures) #:use-module (gnu packages fontutils) #:use-module (gnu packages gcc) @@ -1303,3 +1305,29 @@ available to other researchers.") (delete-file "scanpy/tests/test_neighbors_key_added.py") (delete-file "scanpy/tests/test_pca.py") #t))))))))) + +(define-public rust-gfa + (package + (name "rust-gfa") + (version "0.2.1") + (source + (origin + (method url-fetch) + (uri (crate-uri "gfa" version)) + (file-name + (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "06j22lmlxrcyc1lzpjyls3sa9v75wx5a604856lybmsswikihh0s")))) + (build-system cargo-build-system) + (arguments + `(#:cargo-inputs + (("rust-lazy-static" ,rust-lazy-static-1) + ("rust-nom" ,rust-nom-5)))) + (home-page "https://github.com/chfi/rs-gfa") + (synopsis + "Library for working with graphs in the GFA (Graphical Fragment Assembly) format") + (description + "This package provides a Rust library for working with graphs in the +@dfn{Graphical Fragment Assembly} (GFA) format.") + (license license:expat))) |