diff options
| author | Efraim Flashner | 2019-08-05 04:43:44 -0500 |
|---|---|---|
| committer | Efraim Flashner | 2019-08-05 04:43:44 -0500 |
| commit | 1de344e71b1dd972e7ef69df2535f7464db9151a (patch) | |
| tree | d6c597f6dfa87affe62b1c9256c8b421f08bb7eb /gn/packages/bioinformatics.scm | |
| parent | 50319950fa33913fb8217d019cc7bd67bab4ad0d (diff) | |
| download | guix-bioinformatics-1de344e71b1dd972e7ef69df2535f7464db9151a.tar.gz | |
gn: pindel: Don't use unstable tarball.
* gn/packages/bioinformatics.scm (pindel)[source]: Download using
'git-fetch'.
Diffstat (limited to 'gn/packages/bioinformatics.scm')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 11 |
1 files changed, 6 insertions, 5 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 0c88442..5b77fb1 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -939,12 +939,13 @@ manipulations on VCF files.") (name "pindel") (version "0.2.5b8") (source (origin - (method url-fetch) - (uri (string-append "https://github.com/genome/pindel/archive/v" - version ".tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/genome/pindel.git") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) (sha256 - (base32 "06bsf0psxwf7h5p3j97xkh9k5qrwhxh6xn942y1j1m2inyhgs8bz")))) + (base32 "16a32fbgv1n58nfcxa1nyphrdrad80sgpinfa9p028n6plwycpww")))) (build-system gnu-build-system) (inputs `(("samtools" ,samtools) |