diff options
| author | pjotrp | 2016-02-28 12:45:40 +0000 |
|---|---|---|
| committer | pjotrp | 2016-02-28 12:45:40 +0000 |
| commit | 71684ab0577b60b53d4a459e97bb5540952ea4d9 (patch) | |
| tree | 0fe8aa87c40f567213feaca19284e2a9fa75e8c5 /gn/packages/bioinformatics.scm | |
| parent | d5a9e7dd0616461ec9960b9e57665dcc766d9b33 (diff) | |
| download | guix-bioinformatics-71684ab0577b60b53d4a459e97bb5540952ea4d9.tar.gz | |
r-wgcna deps
Diffstat (limited to 'gn/packages/bioinformatics.scm')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 12 |
1 files changed, 8 insertions, 4 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index dd7e77e..92be2b4 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -49,7 +49,7 @@ #:use-module (srfi srfi-1)) (define-public r-wgcna - (let ((commit "41b24edb522a200b671e8e25f6ffb67769113a49")) + (let ((commit "425bc170cc0873ddbd414675ac40f6d4d724c7cb")) (package (name "r-wgcna") (version (string-append "1.49-" commit)) @@ -62,18 +62,19 @@ (file-name (string-append name "-" commit)) (sha256 (base32 - "1ad2lgdz8dy8imn4my83jz4xqp4m3phyakfssmdjcp362g739p2w")))) + "1zqnsb8s3065rq1y2y3l79zi8wmdwjkcjls96ypycrb7pmdil58j")))) (properties `((upstream-name . "WGCNA"))) (build-system r-build-system) (propagated-inputs `( ;; ("r-annotationdbi" ,r-annotationdbi) ; ("r-biocparallel" ,r-biocparallel) ("r-dynamictreecut" ,r-dynamictreecut) + ("r-doparallel" ,r-doparallel) ("r-fastcluster" ,r-fastcluster) ("r-foreach" ,r-foreach) - ; ("r-go-db" ,r-go-db) + ("r-go-db" ,r-go-db) ; ("r-grdevices" ,r-grdevices) - ; ("r-hmisc" ,r-hmisc) + ("r-hmisc" ,r-hmisc) ("r-impute" ,r-impute) ("r-matrixstats" ,r-matrixstats) ; ("r-parallel" ,r-parallel) @@ -83,6 +84,9 @@ ; ("r-survival" ,r-survival) ; ("r-utils" ,r-utils) )) + (arguments + `( + #:tests? #f)) ; no 'setup.py test' (home-page "http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/") (synopsis |