aboutsummaryrefslogtreecommitdiff
path: root/gn/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorArun Isaac2024-10-23 00:01:24 +0100
committerArun Isaac2024-10-23 00:06:43 +0100
commitb229931a7e69966ce0a269ca4a0aa1a1d3257bf4 (patch)
tree00cd4a44aba6c198d26bcbb9a92b96aa55a700a3 /gn/packages/bioinformatics.scm
parentcb3f9cc89124fb9fedf97cf6299d0e5e4e1a6102 (diff)
downloadguix-bioinformatics-b229931a7e69966ce0a269ca4a0aa1a1d3257bf4.tar.gz
gn: graphaligner: Use G-expressions.
* gn/packages/bioinformatics.scm (graphaligner): Use G-expressions.
Diffstat (limited to 'gn/packages/bioinformatics.scm')
-rw-r--r--gn/packages/bioinformatics.scm20
1 files changed, 10 insertions, 10 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm
index 3468108..099636f 100644
--- a/gn/packages/bioinformatics.scm
+++ b/gn/packages/bioinformatics.scm
@@ -1939,17 +1939,17 @@ The path-guided stochastic gradient descent based 1D sort implemented in
(install-file header (string-append out "/include")))
(find-files "src" "\\.h(pp)?$"))))))))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("sparsehash" ,sparsehash)))
+ (list pkg-config
+ sparsehash))
(inputs
- `(("boost" ,boost)
- ("concurrentqueue" ,concurrentqueue)
- ("jemalloc" ,jemalloc)
- ("libdivsufsort" ,libdivsufsort)
- ("mummer" ,mummer)
- ("protobuf" ,protobuf)
- ("sdsl-lite" ,sdsl-lite)
- ("zlib" ,zlib)))
+ (list boost
+ concurrentqueue
+ jemalloc
+ libdivsufsort
+ mummer
+ protobuf
+ sdsl-lite
+ zlib))
(home-page "https://github.com/maickrau/GraphAligner")
(synopsis "Seed-and-extend program for aligning genome graphs")
(description "Seed-and-extend program for aligning long error-prone reads to