diff options
| author | Pjotr Prins | 2016-01-21 03:57:45 -0500 |
|---|---|---|
| committer | Pjotr Prins | 2016-01-21 03:57:45 -0500 |
| commit | 14b9c21307f286363b17e898ae85bb8c9f1547f0 (patch) | |
| tree | 48e6491a7fc914076f27d50584f032222170d193 /gn/packages/bioinformatics.scm | |
| parent | 0cf828b6c286690d04708b7f317712e0b473dbf8 (diff) | |
| download | guix-bioinformatics-14b9c21307f286363b17e898ae85bb8c9f1547f0.tar.gz | |
Adding to genenetwork install
Diffstat (limited to 'gn/packages/bioinformatics.scm')
| -rw-r--r-- | gn/packages/bioinformatics.scm | 21 |
1 files changed, 14 insertions, 7 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 6dd2fc9..9ca4fc1 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -16,6 +16,7 @@ #:use-module (gnu packages) #:use-module (gnu packages algebra) #:use-module (gnu packages base) + #:use-module (gnu packages bioinformatics) #:use-module (gnu packages boost) #:use-module (gnu packages compression) #:use-module (gnu packages cpio) @@ -119,11 +120,11 @@ (license license:gpl2+))) -(define-public genenetwork - (let ((commit "860bdcebde5cbb1898c26da80ac67207480c0803")) +(define-public genenetwork2 + (let ((commit "9e9475053")) (package - (name "genenetwork") - (version (string-append "2.0.alpha." commit)) + (name "genenetwork2") + (version (string-append "2.0." commit)) (source (origin (method git-fetch) (uri (git-reference @@ -132,10 +133,16 @@ (commit commit))) (sha256 (base32 - "0k6i9h3j0vgx00qn0xnah0g52pzwq6wwxvsv1bd1b1mar5p9x11j")))) + "1rzm0m596g2lh8vszfla2dz52frdzfhp0az7mrx2axmfqad90ywl")))) (inputs `(("nginx" ,nginx) - ("python" ,python-2 - ))) + ("python-setuptools" ,python2-setuptools) + ("python-scipy" ,python2-scipy) + ("python-numpy" ,python2-numpy) + ("python-pandas" ,python2-pandas) + ("python" ,python-2) ;; probably superfluous + ("plink" ,plink) ;; probably superfluous + ("r-qtl" ,r-qtl) + )) (build-system python-build-system) (arguments `(#:python ,python-2 |