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author | Pjotr Prins | 2016-01-11 14:08:26 +0300 |
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committer | Pjotr Prins | 2016-01-11 14:08:26 +0300 |
commit | 1bf9dde8a496c07291b24ac185ae49a2d167b7e8 (patch) | |
tree | 64f5e8c91d5c3c5756739d57f3b75b664097efbd /README.md | |
parent | f5a16f24815bc2819a5c4b44b75b10849cba3f3b (diff) | |
download | guix-bioinformatics-1bf9dde8a496c07291b24ac185ae49a2d167b7e8.tar.gz |
README
Diffstat (limited to 'README.md')
-rw-r--r-- | README.md | 54 |
1 files changed, 14 insertions, 40 deletions
@@ -19,51 +19,17 @@ or using a checked out Guix repo with Some (or most) of these package definitions should make it upstream into the GNU Guix repository when tested and stable. -## LLVM D compiler +## Module system -Install with +Install the module envirmonment with git clone https://github.com/genenetwork/guix-bioinformatics.git export GUIX_PACKAGE_PATH=$PWD/guix-bioinformatics/ - guix package -i ldc - - ldc2 --version - - LDC - the LLVM D compiler (0.16.0): - based on DMD v2.067.1 and LLVM 3.6.2 - Default target: x86_64-unknown-linux-gnu - Host CPU: corei7-avx - http://dlang.org - http://wiki.dlang.org/LDC - - Registered Targets: - aarch64 - AArch64 (little endian) - aarch64_be - AArch64 (big endian) - amdgcn - AMD GCN GPUs - arm - ARM - arm64 - ARM64 (little endian) - armeb - ARM (big endian) - cpp - C++ backend - hexagon - Hexagon - mips - Mips - mips64 - Mips64 [experimental] - mips64el - Mips64el [experimental] - mipsel - Mipsel - msp430 - MSP430 [experimental] - nvptx - NVIDIA PTX 32-bit - nvptx64 - NVIDIA PTX 64-bit - ppc32 - PowerPC 32 - ppc64 - PowerPC 64 - ppc64le - PowerPC 64 LE - r600 - AMD GPUs HD2XXX-HD6XXX - sparc - Sparc - sparcv9 - Sparc V9 - systemz - SystemZ - thumb - Thumb - thumbeb - Thumb (big endian) - x86 - 32-bit X86: Pentium-Pro and above - x86-64 - 64-bit X86: EM64T and AMD64 - xcore - XCore + guix package -i environment-modules + modulecmd --version + VERSION=3.2.10 + DATE=2012-12-21 ## Common Workflow Language (CWL) @@ -76,6 +42,14 @@ Install the common workflow language tool cwltool with cwtool --version 1.0.20150916041152 +## LLVM D compiler + +The LLVM D compiler was added to GNU Guix main stream! + +Install with + + guix package -i ldc + ## R/qtl R-qtl is now part of main stream GNU Guix: |