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| author | pjotrp | 2026-04-08 09:56:42 +0200 |
|---|---|---|
| committer | pjotrp | 2026-04-08 09:56:42 +0200 |
| commit | 004d91175819bebdac24cde3b603b563030b630e (patch) | |
| tree | 4b5aac551a824ccccc1e89fcb8752a483d869c8a | |
| parent | 184a67222d30510446c16efed016a369325ba46d (diff) | |
| download | guix-bioinformatics-004d91175819bebdac24cde3b603b563030b630e.tar.gz | |
Propagate snakemake (cosigt)
| -rw-r--r-- | gn/packages/pangenome.scm | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/gn/packages/pangenome.scm b/gn/packages/pangenome.scm index 95afc2a..032bb75 100644 --- a/gn/packages/pangenome.scm +++ b/gn/packages/pangenome.scm @@ -20,6 +20,7 @@ #:use-module (gnu packages image-processing) #:use-module (gnu packages maths) #:use-module (gnu packages perl) + #:use-module (gnu packages python-science) #:use-module (gnu packages cmake) #:use-module (gnu packages datastructures) #:use-module (gnu packages jemalloc) @@ -422,7 +423,9 @@ unmapped reads using unique k-mers from pangenome graph alleles.") minimap2 odgi pggb - samtools)) + samtools + snakemake + util-linux)) (home-page "https://github.com/pjotrp/cosigt") (synopsis "Cosine similarity-based structural haplotype genotyper") (description |