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authorPjotr Prins2017-08-21 07:52:25 -0500
committerPjotr Prins2017-08-21 07:52:25 -0500
commite50493dc409464bacaa06775418c32be3f1aacf5 (patch)
treeccfa5622e00e10ae6b0ed0d96336968beb400bd5
parent5a9fa677517f1708e21ee14dcbea59ae4ec7ce08 (diff)
downloadguix-bioinformatics-e50493dc409464bacaa06775418c32be3f1aacf5.tar.gz
Fixes for latest Guix
-rw-r--r--gn/packages/phewas.scm9
1 files changed, 5 insertions, 4 deletions
diff --git a/gn/packages/phewas.scm b/gn/packages/phewas.scm
index 2bd832e..59269ef 100644
--- a/gn/packages/phewas.scm
+++ b/gn/packages/phewas.scm
@@ -19,6 +19,7 @@
   #:use-module (gnu packages boost)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages cpio)
+  #:use-module (gnu packages cran)
   #:use-module (gnu packages file)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages java)
@@ -117,14 +118,14 @@ genome-wide association studies in structured populations.")
 (define-public r-fgsea
   (package
     (name "r-fgsea")
-    (version "1.0.2")
+    (version "1.2.1")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "fgsea" version))
        (sha256
         (base32
-         "1yq4s4g4xxzcpkv9dpbg29444iy38vfgwj4wgr47rjjq8njfblfx"))))
+         "1vl9i889800avi8valkl0bz9jrjz71anzmal245ls9gwydrv0dpc"))))
     (build-system r-build-system)
     ; (native-inputs
                                         ;  `(("gfortran" ,gfortran)))
@@ -145,14 +146,14 @@ genome-wide association studies in structured populations.")
 (define-public r-qvalue
   (package
     (name "r-qvalue")
-    (version "2.6.0")
+    (version "2.8.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "qvalue" version))
        (sha256
         (base32
-         "1dijh11v1kr29gnikq09pkdvm3qwmp1a406ahx9l4j6mgn8hlsfq"))))
+         "1dxdwa767a9r8n61r272ypi09qblcdfpzzwkmri74y5mbp1r3y4i"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-reshape2" ,r-reshape2)