diff options
| author | Pjotr Prins | 2020-05-22 06:55:02 -0500 |
|---|---|---|
| committer | Pjotr Prins | 2020-05-22 06:55:02 -0500 |
| commit | 3d6be821a8085cddf0e9011a99a386daa15d0cc6 (patch) | |
| tree | 8864a63ec2daad6d56cc741a403e91d44770dda2 | |
| parent | 934c2f79984073bac2cbe184c1de562e1580325c (diff) | |
| download | guix-bioinformatics-3d6be821a8085cddf0e9011a99a386daa15d0cc6.tar.gz | |
Swapping mysql for mariadb
| -rw-r--r-- | gn/packages/gemma.scm | 1 | ||||
| -rw-r--r-- | gn/packages/genenetwork.scm | 6 |
2 files changed, 4 insertions, 3 deletions
diff --git a/gn/packages/gemma.scm b/gn/packages/gemma.scm index d602679..9bbc960 100644 --- a/gn/packages/gemma.scm +++ b/gn/packages/gemma.scm @@ -166,6 +166,7 @@ (native-inputs ; for running tests `(("perl" ,perl) ("which" ,which) + ; ("gcc@8" ,gcc-8) )) (build-system gnu-build-system) diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index 8696db0..4bd5c94 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -100,7 +100,7 @@ (propagated-inputs `(("python" ,python) ("elixir" ,elixir) - ("mysql" ,mysql) + ("mariadb" ,mariadb) ("gnu-make" ,gnu-make) ; needed for mysqlex )) (arguments @@ -262,7 +262,7 @@ location of a putative QTL.") ("r-qtl" ,r-qtl) ("r-wgcna" ,r-wgcna) ("redis" ,redis) - ("mysql" ,mysql) + ("mariadb" ,mariadb) ("gemma" ,gemma-gn2-git) ("gemma-wrapper" ,gemma-wrapper) ; ("genenetwork2-files-small" ,genenetwork2-files-small) @@ -489,7 +489,7 @@ written in C") ("r-ctl" ,r-ctl) ("r-qtl" ,r-qtl) ("redis" ,redis) - ("mysql" ,mysql) + ("mariadb" ,mariadb) ("nginx" ,nginx) ("r-wgcna" ,r-wgcna) ;; ("r-phewas" ,r-phewas) |