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| author | pjotrp | 2017-02-23 14:37:42 +0000 |
|---|---|---|
| committer | pjotrp | 2017-02-23 14:37:42 +0000 |
| commit | 76dae6bcf47a1a127f53b43fc96d73ed5048c5a9 (patch) | |
| tree | 635b27c884659cf992e7131b8e991b245a0d381b | |
| parent | b46711e9a22e6ba34f8a375d498a0d15296e9db6 (diff) | |
| download | guix-bioinformatics-76dae6bcf47a1a127f53b43fc96d73ed5048c5a9.tar.gz | |
shunit2 package
| -rw-r--r-- | gn/packages/bioinformatics.scm | 1 | ||||
| -rw-r--r-- | gn/packages/shell.scm | 47 |
2 files changed, 48 insertions, 0 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 2dcaf62..0533371 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -940,6 +940,7 @@ association studies (GWAS).") (native-inputs `(("ldc" ,ldc) ("lz4" ,lz4) + ("shunit2" ,shunit2) ("zlib" ,zlib) ("coreutils" ,coreutils) ; for env ("perl" ,perl) ; Needed for htslib diff --git a/gn/packages/shell.scm b/gn/packages/shell.scm new file mode 100644 index 0000000..185ac17 --- /dev/null +++ b/gn/packages/shell.scm @@ -0,0 +1,47 @@ +(define-module (gn packages shell) + #:use-module (guix packages) + #:use-module (guix download) + #:use-module (guix build-system gnu) + #:use-module (gnu packages) + #:use-module (guix git-download) + #:use-module ((guix licenses) #:prefix license:) + ) + +(define-public shunit2 + (let ((commit "60dd60bcd1573befe38465010263ab242e55811d")) + (package + (name "shunit2") + (version (string-append "2.1.7-" (string-take commit 7))) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/kward/shunit2.git") + (commit commit))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 "11savxc6qliqv25kv59qak6j7syjv95hbpmq1szn1mzn32g2gc25")))) + (build-system gnu-build-system) + (arguments + `( + #:tests? #f ;; no tests-suite + #:phases + (modify-phases %standard-phases + (delete 'configure) + (delete 'build) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (bin (string-append out "/bin"))) + (write (string-append "****************" bin)) + (copy-file "2.1/src/shunit2" (string-append bin "/shunit2")) + #t + )))) + )) + (home-page "https://code.google.com/archive/p/shunit2/") + (synopsis "xUnit based unit testing for Unix shell scripts") + (description + "shUnit2 is a xUnit unit test framework for Bourne based shell +scripts, and it is designed to work in a similar manner to JUnit, +PyUnit, etc. If you have ever had the desire to write a unit test for +a shell script, shUnit2 can do the job.") + (license license:lgpl2.0)))) |