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authorMuriithi Frederick Muriuki2018-10-09 12:42:28 +0000
committerMuriithi Frederick Muriuki2018-10-09 12:42:28 +0000
commitb9966c3ad18631b7e8ad84ae9b1d128f573709f3 (patch)
tree282a3f3d8cf557a1b494283efa2198e995ca020f
parentc4a0501c05a29f8272a058bcf8329aeb28136123 (diff)
parent377109d375c94eec18073c7260e63ca31d3773b6 (diff)
downloadguix-bioinformatics-b9966c3ad18631b7e8ad84ae9b1d128f573709f3.tar.gz
Merge branch 'master' into 'master'
Master See merge request genenetwork/guix-bioinformatics!22
-rw-r--r--gn/packages/edash.scm65
1 files changed, 61 insertions, 4 deletions
diff --git a/gn/packages/edash.scm b/gn/packages/edash.scm
index b19042a..e4d3a9f 100644
--- a/gn/packages/edash.scm
+++ b/gn/packages/edash.scm
@@ -7,10 +7,13 @@
#:use-module (gnu packages web)
#:use-module (gnu packages python)
#:use-module (gnu packages python-web)
+ #:use-module (gnu packages python-crypto)
#:use-module (gnu packages compression)
#:use-module (gnu packages time)
+ #:use-module (gnu packages databases)
#:use-module (gnu packages check)
- #:use-module (gn packages web))
+ #:use-module (gn packages web)
+ #:use-module (gn packages python))
(define-public python-s3transfer-0.1.13
(package
@@ -86,6 +89,50 @@ interface to the Amazon Web Services (AWS) API.")
(description "The AWS SDK for Python")
(license license:asl2.0)))
+(define-public python-speaklater
+ (package
+ (name "python-speaklater")
+ (version "1.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "speaklater" version))
+ (sha256
+ (base32
+ "1ab5dbfzzgz6cnz4xlwx79gz83id4bhiw67k1cgqrlzfs0va7zjr"))))
+ (build-system python-build-system)
+ (home-page
+ "http://github.com/mitsuhiko/speaklater")
+ (synopsis
+ "implements a lazy string for python useful for use with gettext")
+ (description
+ "implements a lazy string for python useful for use with gettext")
+ (license license:bsd-3)))
+
+(define-public python-flask-mail
+ (package
+ (name "python-flask-mail")
+ (version "0.9.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "flask-mail" version))
+ (sha256
+ (base32
+ "0hazjc351s3gfbhk975j8k65cg4gf31yq404yfy0gx0bjjdfpr92"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-mock" ,python-mock)
+ ("python-nose" ,python-nose)
+ ("python-flask" ,python-flask)
+ ("python-blinker" ,python-blinker)
+ ("python-speaklater" ,python-speaklater)))
+ (home-page
+ "https://github.com/rduplain/flask-mail")
+ (synopsis "Flask extension for sending email")
+ (description "Flask extension for sending email")
+ (license license:bsd-3)))
+
(define-public edash
(let ((md5 "93e745e9c"))
(package
@@ -101,9 +148,11 @@ interface to the Amazon Web Services (AWS) API.")
(build-system trivial-build-system)
(native-inputs `(("unzip" ,unzip)
("source" ,source)))
- (inputs `(("sassc" ,sassc)))
+ ;;(inputs `(("sassc" ,sassc)))
(propagated-inputs
`(("python" ,python)
+ ("gunicorn" ,gunicorn)
+ ("python-wrapper" ,python-wrapper)
("python-elasticsearch" ,python-elasticsearch)
("python-flask" ,python-flask)
("python-jinja2" ,python-jinja2)
@@ -111,8 +160,16 @@ interface to the Amazon Web Services (AWS) API.")
("python-misaka" ,python-misaka)
("python-pygit2" ,python-pygit2)
("web-bootstrap" ,web-bootstrap)
- ("sassc" ,sassc)
- ("python-boto3" ,python-boto3)))
+ ;;("sassc" ,sassc)
+ ("python-boto3" ,python-boto3)
+ ("python-pytest" ,python-pytest)
+ ("python-flask-login" ,python-flask-login)
+ ("python-passlib" ,python-passlib)
+ ("python-pyjwt" ,python-pyjwt)
+ ("python-sqlalchemy" ,python-sqlalchemy)
+ ("python-flask-sqlalchemy" ,python-flask-sqlalchemy)
+ ("python-flask-mail" ,python-flask-mail)
+ ("python-flask-wtf" ,python-flask-wtf)))
(arguments
`(#:modules ((guix build utils))
#:builder