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authorpjotrp2018-07-13 06:50:47 +0000
committerpjotrp2018-07-13 06:50:47 +0000
commitdaf1517382d4a68286d5f6186282c70b4932dafe (patch)
treeb3c7b4d5ef98f53b7598fc143ce8cc4df73efccb
parentf293058e52b022d7fe17c9e56864919ac6e23caa (diff)
downloadguix-bioinformatics-daf1517382d4a68286d5f6186282c70b4932dafe.tar.gz
gemma-dev script
-rw-r--r--gn/packages/gemma.scm36
1 files changed, 36 insertions, 0 deletions
diff --git a/gn/packages/gemma.scm b/gn/packages/gemma.scm
index 5e9b4b7..1bc2cb1 100644
--- a/gn/packages/gemma.scm
+++ b/gn/packages/gemma.scm
@@ -313,3 +313,39 @@ association studies (GWAS).")
(description "Gemma wrapper")
(home-page "https://rubygems.org/gems/bio-gemma-wrapper")
(license license:gpl3)))
+
+(define-public gemma-dev
+ (let ((md5 "93e745e9c"))
+ (package
+ (name "gemma-dev")
+ (version "0.0.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri "http://biogems.info/genenetwork2-2.0-a8fcff4.svg") ; any old file
+ (file-name (string-append name "-" md5))
+ (sha256
+ (base32 "0rir1mcn3a8i1mbw3ppgnjl7wg71mapljik7n3v5i8j5ic95mqr5"))))
+ (build-system trivial-build-system)
+ (native-inputs `(("unzip" ,unzip)
+ ("source" ,source)))
+ (inputs `(("sassc" ,sassc)))
+ (propagated-inputs
+ `(("gemma-wrapper" ,gemma-wrapper)
+ ))
+ (arguments
+ `(#:modules ((guix build utils))
+ #:builder
+ (begin
+ (use-modules (guix build utils))
+ (let ((target (string-append (assoc-ref %outputs "out")
+ "/share")))
+ (write target)
+ (mkdir-p target)
+ ; (copy-recursively (assoc-ref %build-inputs "source") target)
+ #t))))
+
+ (home-page "http://github.com/genetics-statistics/")
+ (synopsis "GEMMA development environment imports build tools, gemma-wrapper and faster-lmm-d")
+ (description "Gemma-development")
+ (license license:gpl3))))