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authorRoel Janssen2016-03-23 14:31:34 +0100
committerRoel Janssen2016-03-23 14:31:34 +0100
commit2c95c0053a6ffa3339b18a0f585dbb82b555b3e8 (patch)
treeee515eda6931946795f57552728eb57d0653471d /4store-fix-buildsystem.patch
parenta8604b2b3ba3627e77c8f7189f664a368c750b5e (diff)
downloadguix-bioinformatics-2c95c0053a6ffa3339b18a0f585dbb82b555b3e8.tar.gz
gn: Add 4store.
* gn/packages/4store.scm (4store): New variable. * 4store-fix-buildsystem.patch: New file.
Diffstat (limited to '4store-fix-buildsystem.patch')
-rw-r--r--4store-fix-buildsystem.patch56
1 files changed, 56 insertions, 0 deletions
diff --git a/4store-fix-buildsystem.patch b/4store-fix-buildsystem.patch
new file mode 100644
index 0000000..a72c4d4
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@@ -0,0 +1,56 @@
+This patch sets a fixed version to avoid needing Git and the .git/ folder.
+It also removes the creation of "/var/lib/4store", which is not available
+during the install phase in GNU Guix.
+
+Patch by Roel Janssen <roel@gnu.org>
+*** 4store-1.1.6-orig/configure.ac Wed Feb 4 19:05:24 2015
+--- 4store-1.1.6/configure.ac Wed Mar 23 11:20:38 2016
+***************
+*** 2,13 ****
+ # Process this file with autoconf to produce a configure script.
+
+ AC_PREREQ([2.50])
+! AC_INIT([4store], m4_esyscmd([./version.sh .version]), [http://4store.org/support/], [4store])
+ AC_CONFIG_SRCDIR([src/backend/backend-intl.h])
+! AM_INIT_AUTOMAKE([1.7 std-options -Wall])
+ AC_CONFIG_HEADERS(4store-config.h)
+
+ # Checks for programs.
+ AC_PROG_LIBTOOL
+ AC_PROG_AWK
+ AC_PROG_CC
+--- 2,14 ----
+ # Process this file with autoconf to produce a configure script.
+
+ AC_PREREQ([2.50])
+! AC_INIT([4store], [1.1.6], [http://4store.org/support/], [4store])
+ AC_CONFIG_SRCDIR([src/backend/backend-intl.h])
+! AM_INIT_AUTOMAKE([1.7 std-options foreign -Wall])
+ AC_CONFIG_HEADERS(4store-config.h)
+
+ # Checks for programs.
++ AM_PROG_AR
+ AC_PROG_LIBTOOL
+ AC_PROG_AWK
+ AC_PROG_CC
+
+*** 4store-1.1.6-orig/src/utilities/Makefile.am Wed Feb 4 19:05:24 2015
+--- 4store-1.1.6/src/utilities/Makefile.am Wed Mar 23 14:05:56 2016
+***************
+*** 13,20 ****
+ noinst_PROGRAMS = lex-file-verify 4s-rid
+
+ install-data-local:
+! mkdir -p $(DESTDIR)@FS_STORE_ROOT@
+! chmod 1777 $(DESTDIR)@FS_STORE_ROOT@
+
+ 4s_backend_destroy_SOURCES = backend-destroy.c
+ 4s_backend_destroy_LDADD = ../common/lib4sintl.a
+--- 13,19 ----
+ noinst_PROGRAMS = lex-file-verify 4s-rid
+
+ install-data-local:
+! echo "Please create the following directory: " $(DESTDIR)@FS_STORE_ROOT@
+
+ 4s_backend_destroy_SOURCES = backend-destroy.c
+ 4s_backend_destroy_LDADD = ../common/lib4sintl.a