From 3e028bf0e9f8239b552bcd4b2d6133bb7965abd9 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Wed, 25 Sep 2024 12:09:46 -0500
Subject: Create new genotype datasets.
---
uploader/templates/genotypes/create-dataset.html | 82 ++++++++++++++++++++++++
uploader/templates/genotypes/list-genotypes.html | 4 +-
2 files changed, 85 insertions(+), 1 deletion(-)
create mode 100644 uploader/templates/genotypes/create-dataset.html
(limited to 'uploader/templates/genotypes')
diff --git a/uploader/templates/genotypes/create-dataset.html b/uploader/templates/genotypes/create-dataset.html
new file mode 100644
index 0000000..10331c1
--- /dev/null
+++ b/uploader/templates/genotypes/create-dataset.html
@@ -0,0 +1,82 @@
+{%extends "genotypes/base.html"%}
+{%from "flash_messages.html" import flash_all_messages%}
+{%from "populations/macro-display-population-card.html" import display_population_card%}
+
+{%block title%}Genotypes — Create Dataset{%endblock%}
+
+{%block pagetitle%}Genotypes — Create Dataset{%endblock%}
+
+{%block lvl4_breadcrumbs%}
+<li {%if activelink=="create-dataset"%}
+ class="breadcrumb-item active"
+ {%else%}
+ class="breadcrumb-item"
+ {%endif%}>
+ <a href="{{url_for('species.populations.genotypes.create_dataset',
+ species_id=species.SpeciesId,
+ population_id=population.Id)}}">Create Dataset</a>
+</li>
+{%endblock%}
+
+{%block contents%}
+{{flash_all_messages()}}
+
+<div class="row">
+ <form id="frm-geno-create-dataset"
+ method="POST"
+ action="{{url_for('species.populations.genotypes.create_dataset',
+ species_id=species.SpeciesId,
+ population_id=population.Id)}}">
+ <legend>Create a new Genotype Dataset</legend>
+
+ <div class="form-group">
+ <label for="txt-geno-dataset-name" class="form-label">Name</label>
+ <input type="text"
+ id="txt-geno-dataset-name"
+ name="geno-dataset-name"
+ required="required"
+ class="form-control" />
+ <small class="form-text text-muted">
+ <p>This is a short representative, but constrained name for the genotype
+ dataset.<br />
+ The field will only accept letters ('A-Za-z'), numbers (0-9), hyphens
+ and underscores. Any other character will cause the name to be
+ rejected.</p></small>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-geno-dataset-fullname" class="form-label">Full Name</label>
+ <input type="text"
+ id="txt-geno-dataset-fullname"
+ name="geno-dataset-fullname"
+ required="required"
+ class="form-control" />
+ <small class="form-text text-muted">
+ <p>This is a longer, more descriptive name for your dataset.</p></small>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-geno-dataset-shortname"
+ class="form-label">Short Name</label>
+ <input type="text"
+ id="txt-geno-dataset-shortname"
+ name="geno-dataset-shortname"
+ class="form-control" />
+ <small class="form-text text-muted">
+ <p>A short name for your dataset. If you leave this field blank, the
+ short name will be set to the same value as the
+ "<strong>Name</strong>" field above.</p></small>
+ </div>
+
+ <div class="form-group">
+ <input type="submit"
+ class="btn btn-primary"
+ value="create dataset" />
+ </div>
+ </form>
+</div>
+{%endblock%}
+
+{%block sidebarcontents%}
+{{display_population_card(species, population)}}
+{%endblock%}
diff --git a/uploader/templates/genotypes/list-genotypes.html b/uploader/templates/genotypes/list-genotypes.html
index cecb5a3..e4c39eb 100644
--- a/uploader/templates/genotypes/list-genotypes.html
+++ b/uploader/templates/genotypes/list-genotypes.html
@@ -123,7 +123,9 @@
There is no genotype dataset defined for this population.
</p>
<p>
- <a href="#create-new-genotype-dataset"
+ <a href="{{url_for('species.populations.genotypes.create_dataset',
+ species_id=species.SpeciesId,
+ population_id=population.Id)}}"
title="Create a new genotype dataset for the '{{population.FullName}}' population for the '{{species.FullName}}' species."
class="btn btn-primary">
create new genotype dataset</a></p>
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