From 6804b610266d0804dd5c391f5171943429c285cd Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Wed, 13 Apr 2022 12:37:38 +0300
Subject: Check for `DuplicateHeader` errors in `parse_file` function

---
 quality_control/parsing.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/quality_control/parsing.py b/quality_control/parsing.py
index eda9181..b7b0ff5 100644
--- a/quality_control/parsing.py
+++ b/quality_control/parsing.py
@@ -6,7 +6,7 @@ import quality_control.average as avg
 import quality_control.standard_error as se
 from quality_control.headers import valid_header
 from quality_control.errors import (
-    ParseError, InvalidCellValue, InvalidHeaderValue)
+    ParseError, DuplicateHeader, InvalidCellValue, InvalidHeaderValue)
 
 class FileType(Enum):
     AVERAGE = 1
@@ -57,7 +57,7 @@ def parse_file(filepath: str, filetype: FileType, strains_filepath: str):
                 yield LINE_PARSERS[filetype](
                     tuple(field.strip() for field in line.split("\t")))
                 seek_pos = seek_pos + len(line)
-    except (InvalidCellValue, InvalidHeaderValue) as err:
+    except (DuplicateHeader, InvalidCellValue, InvalidHeaderValue) as err:
         raise ParseError({
             "filepath": filepath,
             "filetype": filetype,
-- 
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