| Age | Commit message (Expand) | Author |
|---|
| 2023-11-30 | Bug: Fix insertion error•••Fix a bug that was causing the data insertion to fail.
| Frederick Muriuki Muriithi |
| 2023-11-30 | Fix errors caught by pylint and mypy. | Frederick Muriuki Muriithi |
| 2023-11-15 | Log out DB errors even when handled•••Log out any DB errors that occur to help with tracking and debugging
failures.
| Frederick Muriuki Muriithi |
| 2023-11-15 | Remove debugging statement. | Frederick Muriuki Muriithi |
| 2023-11-15 | Bug: Insert ProbeSets before average data and cross-refs•••Insert the ProbeSets first before inserting the average data and
cross-referencing it.
| Frederick Muriuki Muriithi |
| 2023-11-15 | mypy: Fix typing errors. | Frederick Muriuki Muriithi |
| 2023-11-15 | Linting: Fix linting errors. | Frederick Muriuki Muriithi |
| 2023-10-30 | Prevent overwrite. Avoid inserting same probeset multiple times.•••* Avoid overwriting existing data by adding a random string to the
name of the ProbeSet
* Read ProbeSet names separately from the means for the strains, to
avoid entering the same ProbeSet record over and over with varying
names.
| Frederick Muriuki Muriithi |
| 2023-10-18 | Link to `ProbeSet.Id` in XRef Table•••The "ProbeSetId" value in the file is actually stored in the database
in the `ProbeSet.Name` field, whereas the `ProbeSetXRef` table
actually uses the `ProbeSet.Id` value to define the
relationships. This commit fixes that issue.
| Frederick Muriuki Muriithi |
| 2023-10-16 | Fix bug: Insert ProbeSets if they do not exist. | Frederick Muriuki Muriithi |
| 2023-10-16 | Fix bug: Provide the platform_id to `insert_means` | Frederick Muriuki Muriithi |
| 2023-10-16 | Fix bug: parsing fields from query. | Frederick Muriuki Muriithi |
| 2022-08-05 | Update job status. Display stdout and stderr outputs•••* Display the status of the job, as it is running
* Display STDERR output if an error occurs
* Display STDOUT output as job is running and on successful completion
of the job
| Frederick Muriuki Muriithi |
| 2022-08-04 | Format queries for output. Get rid of extraneous output. | Frederick Muriuki Muriithi |
| 2022-07-19 | Save standard error data. Fix linting and typing errors. | Frederick Muriuki Muriithi |
| 2022-07-19 | Implement data insertion (averages/means)•••* quality_control/file_utils.py (new file): extract common file
utilities.
* quality_control/parsing.py (refactor): extract common file
utilities.
* scripts/insert_data.py: Implement data insertion for averages/means
| Frederick Muriuki Muriithi |
