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2024-03-19Add debugging statements to track upload of R/qtl2 bundle.Frederick Muriuki Muriithi
2024-03-19Query by `Id` rather than `ProbeFreezeId`Frederick Muriuki Muriithi
2024-03-15Move defaults settings into qc_app module.Frederick Muriuki Muriithi
2024-03-14Update symbolic linkFrederick Muriuki Muriithi
2024-03-12Build up correct path to default settingsFrederick Muriuki Muriithi
2024-03-11Rename moduleFrederick Muriuki Muriithi
2024-03-11Fix package name: gnqc-py to gn-uploaderFrederick Muriuki Muriithi
2024-03-11Add guix-past as a channel dependencyFrederick Muriuki Muriithi
2024-03-11Make guix-bioinformatics a dependency for this channel.Frederick Muriuki Muriithi
2024-03-08Update packaging and distribution declarations.Frederick Muriuki Muriithi
2024-03-08Rename package for guixFrederick Muriuki Muriithi
2024-03-04Use `Id` rather than `ProbeFreezeId`.Frederick Muriuki Muriithi
2024-03-04Display flash messages correctly.Frederick Muriuki Muriithi
2024-02-28tests: test with just the message - don't include markupFrederick Muriuki Muriithi
2024-02-28tests: Update unit tests: remove use of obsoleted functions.Frederick Muriuki Muriithi
2024-02-28Remove last vestiges of flask's "instance path" configurations.Frederick Muriuki Muriithi
2024-02-28Fix bug: fetch from cursor, not return from cursor.execute(…)load-raw-data-no-parsingFrederick Muriuki Muriithi
2024-02-27Remove use of instance path in configurations.Frederick Muriuki Muriithi
2024-02-21Check that samples/cases are consistentFrederick Muriuki Muriithi
2024-02-21Pass 'filename' value to error checker function.Frederick Muriuki Muriithi
2024-02-20Track filename in the errorsFrederick Muriuki Muriithi
2024-02-20Generalise fetching of samples/cases/individuals.Frederick Muriuki Muriithi
2024-02-20Read samples from geno file.Frederick Muriuki Muriithi
2024-02-20Read each file separatelyFrederick Muriuki Muriithi
2024-02-20Stand-alone function to read control fileFrederick Muriuki Muriithi
2024-02-16Replace genotype codes with values in control file.Frederick Muriuki Muriithi
2024-02-16Convert missing value codes to NoneFrederick Muriuki Muriithi
2024-02-16Strip comment lines.Frederick Muriuki Muriithi
2024-02-16Read raw text data from a file in the zip bundleFrederick Muriuki Muriithi
2024-02-16Documentation: Add section on configurations.Frederick Muriuki Muriithi
2024-02-15Filter out NULL valuesFrederick Muriuki Muriithi
2024-02-15Refactor checking for user input errors.Frederick Muriuki Muriithi
2024-02-15Only log out information if the check is actually run.Frederick Muriuki Muriithi
2024-02-15Verify that the file actually existFrederick Muriuki Muriithi
2024-02-15Provide only the file name, not full path.Frederick Muriuki Muriithi
2024-02-15Provide the log messages to the status page.Frederick Muriuki Muriithi
2024-02-14Provide endpoint to send data to.Frederick Muriuki Muriithi
2024-02-14Extract upload progress indication codeFrederick Muriuki Muriithi
2024-02-13Add some parallelism to the QC ChecksFrederick Muriuki Muriithi
2024-02-13Provide nice UI progress indicators.Frederick Muriuki Muriithi
2024-02-13Make "FILE_TYPES" part of public interface for module/package.Frederick Muriuki Muriithi
2024-02-12Refactor: Use new decimal places checker.Frederick Muriuki Muriithi
2024-02-12Build generic decimal places checker.Frederick Muriuki Muriithi
2024-02-12Check for errors in the 'phenose' file.Frederick Muriuki Muriithi
2024-02-12Check for errors in the 'pheno' file.Frederick Muriuki Muriithi
2024-02-12Improve error display for generic errorsFrederick Muriuki Muriithi
2024-02-12Collect and display errors on 'geno' files in the bundle.Frederick Muriuki Muriithi
2024-02-12Add scaffolding for running individual files' QC checksFrederick Muriuki Muriithi
2024-02-12UI: Provide QC successful results pageFrederick Muriuki Muriithi
2024-02-12Extract missing files check to external functionFrederick Muriuki Muriithi
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-22 13:40:10 +0000