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gn-uploader: Data uploader for GeneNetwork
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Author
2023-12-18
Samples: Hook-up external async script to upload the samples.
Frederick Muriuki Muriithi
2023-12-14
samples: Create external script and fix some bugs.
Frederick Muriuki Muriithi
2023-12-14
Pass connection to `species_by_id` function.
Frederick Muriuki Muriithi
2023-12-11
samples: Fix bugs in code saving samples to db
Frederick Muriuki Muriithi
2023-12-07
Samples: Read an save data to db.
Frederick Muriuki Muriithi
2023-12-07
Samples: Provide preview feature.
Frederick Muriuki Muriithi
2023-12-06
Feature: Upload Samples/Cases
Frederick Muriuki Muriithi
2023-11-30
Remove link to non-existent file.
Frederick Muriuki Muriithi
2023-11-30
Error logging: Add more details to help with debugging.
Frederick Muriuki Muriithi
2023-11-30
Bug: Fix insertion error
Frederick Muriuki Muriithi
2023-11-30
Handle duplicate dataset creation error
Frederick Muriuki Muriithi
2023-11-30
Fix errors caught by pylint and mypy.
Frederick Muriuki Muriithi
2023-11-28
Handle generic MySQL errors at the top-level.
Frederick Muriuki Muriithi
2023-11-28
Capture, log and handle generic exceptions
Frederick Muriuki Muriithi
2023-11-24
QC: Check for only one decimal place.
Frederick Muriuki Muriithi
2023-11-15
Log out DB errors even when handled
Frederick Muriuki Muriithi
2023-11-15
Remove debugging statement.
Frederick Muriuki Muriithi
2023-11-15
Bug: Insert ProbeSets before average data and cross-refs
Frederick Muriuki Muriithi
2023-11-15
UI: Remove 'Full Name' and 'Short Name' fields for study.
Frederick Muriuki Muriithi
2023-11-15
UI: Only show GeneChipId and GeneChipName
Frederick Muriuki Muriithi
2023-11-15
mypy: Fix typing errors.
Frederick Muriuki Muriithi
2023-11-15
Linting: Fix linting errors.
Frederick Muriuki Muriithi
2023-11-15
Commit changes on query success.
Frederick Muriuki Muriithi
2023-11-15
Provide default `AuthorisedUsers` value.
Frederick Muriuki Muriithi
2023-10-30
Prevent overwrite. Avoid inserting same probeset multiple times.
Frederick Muriuki Muriithi
2023-10-18
Link to `ProbeSet.Id` in XRef Table
Frederick Muriuki Muriithi
2023-10-18
Explicitly specify columns
Frederick Muriuki Muriithi
2023-10-16
Fix bug: Insert ProbeSets if they do not exist.
Frederick Muriuki Muriithi
2023-10-16
Fix bug: Provide the platform_id to `insert_means`
Frederick Muriuki Muriithi
2023-10-16
Fix bug: parsing fields from query.
Frederick Muriuki Muriithi
2023-10-16
Indicate progress for data insert.
Frederick Muriuki Muriithi
2023-10-16
Link study to ProbeSetFreeze table.
Frederick Muriuki Muriithi
2023-01-17
Add link back to index page on abort or errors
Frederick Muriuki Muriithi
2023-01-17
upload: Enable cancelling an upload.
Frederick Muriuki Muriithi
2022-12-23
Help: Provide some help content for end user
Frederick Muriuki Muriithi
2022-11-16
ui: provide error messaging if file is not selected.
Frederick Muriuki Muriithi
2022-11-16
ui: Don't show upload progress indicator if file is not selected.
Frederick Muriuki Muriithi
2022-11-16
tests: Fix some failing tests
Frederick Muriuki Muriithi
2022-11-16
qc: Allow whole numbers or numbers where the decimals are all zeroes
Frederick Muriuki Muriithi
2022-11-16
ui: Only display the "alert-success" green on completion
Frederick Muriuki Muriithi
2022-11-12
Accept plain text (text/plain) files
Frederick Muriuki Muriithi
2022-09-16
Add redis and mariadb as propagated inputs
Frederick Muriuki Muriithi
2022-09-16
Deactivate tests
Frederick Muriuki Muriithi
2022-09-16
Config: Add apache2 sample config file
Frederick Muriuki Muriithi
2022-09-16
Add dependency: gunicorn
Frederick Muriuki Muriithi
2022-09-08
Use sys.executable and setup default environment
Frederick Muriuki Muriithi
2022-09-08
Update dependencies
Frederick Muriuki Muriithi
2022-08-31
Commit missing files.
Frederick Muriuki Muriithi
2022-08-31
Update test: use new script name.
Frederick Muriuki Muriithi
2022-08-31
Provide database port where relevant.
Frederick Muriuki Muriithi
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