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rewrite-rqtl2-qc
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gn-uploader: Data uploader for GeneNetwork
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2024-08-21
Save errors for each file in lists. Parallelise error checking.
rewrite-rqtl2-qc
Frederick Muriuki Muriithi
2024-08-16
Rewrite the QC code for R/qtl2
Frederick Muriuki Muriithi
2024-08-16
Ignore comment lines.
Frederick Muriuki Muriithi
2024-08-16
Log out correct parameters.
Frederick Muriuki Muriithi
2024-08-13
Bug: cross reference with NULL cM when "gmap" file is absent
Frederick Muriuki Muriithi
2024-08-12
Bug: Ensure file type values are lists.
Frederick Muriuki Muriithi
2024-08-12
Update check for missing files: Check from directory.
Frederick Muriuki Muriithi
2024-08-12
Add utility to transpose CSVs, renaming the original file.
Frederick Muriuki Muriithi
2024-08-12
Define new InvalidValue error type.
Frederick Muriuki Muriithi
2024-08-12
Rename module: Module contains exceptions classes.
Frederick Muriuki Muriithi
2024-08-09
Read R/qtl2 control data from a directory with extracted files.
Frederick Muriuki Muriithi
2024-08-08
Function to transpose CSV files.
Frederick Muriuki Muriithi
2024-08-08
Add utility function to extract R/qtl2 zip bundles
Frederick Muriuki Muriithi
2024-08-08
Fix linting issues.
Frederick Muriuki Muriithi
2024-08-08
Fix bugs and pass in logger to functions.
Frederick Muriuki Muriithi
2024-08-08
Set up logging for the application.
Frederick Muriuki Muriithi
2024-08-07
Update installer manifest.
Frederick Muriuki Muriithi
2024-08-07
Make passing SQL_URI to `database_connection` mandatory.
Frederick Muriuki Muriithi
2024-08-06
Pass logger on to inner functions
Frederick Muriuki Muriithi
2024-08-06
Override `client_secret_post`: use JSON
Frederick Muriuki Muriithi
2024-08-06
Avoid hitting auth server to check for token
Frederick Muriuki Muriithi
2024-08-05
Fix token revocation
Frederick Muriuki Muriithi
2024-08-05
Display the stack trace correctly on the template.
Frederick Muriuki Muriithi
2024-08-05
If no user is logged in, notify and redirect appropriately.
Frederick Muriuki Muriithi
2024-08-05
Provide a generalised way to handle errors and exceptions.
Frederick Muriuki Muriithi
2024-08-05
Put endpoints behind an authorisation check
Frederick Muriuki Muriithi
2024-08-05
mypy and pylint fixes.
Frederick Muriuki Muriithi
2024-08-05
Enable logout.
Frederick Muriuki Muriithi
2024-08-05
Differentiate python's requests library from our monadic wrappers.
Frederick Muriuki Muriithi
2024-08-05
Fix bugs in POST wrapper for OAuth2 client
Frederick Muriuki Muriithi
2024-08-05
Add OAuth2/JWK-related endpoints.
Frederick Muriuki Muriithi
2024-07-26
Add module to handle the JSON Web Keys.
Frederick Muriuki Muriithi
2024-07-26
Add wrappers for OAuth2Session's `get` and `post` methods. Fix bugs.
Frederick Muriuki Muriithi
2024-07-26
Provide UI for enabling login to the application.
Frederick Muriuki Muriithi
2024-07-26
Initialise sessions for the application.
Frederick Muriuki Muriithi
2024-07-26
Rename configuration variable
Frederick Muriuki Muriithi
2024-07-26
Setup secrets from config file.
Frederick Muriuki Muriithi
2024-07-26
authorisation module: utilities for basic authorisation.
Frederick Muriuki Muriithi
2024-07-26
OAuth2 package: Handle OAuth2 related issues
Frederick Muriuki Muriithi
2024-07-26
Add monadic wrapper for requests library.
Frederick Muriuki Muriithi
2024-07-25
Add session module: handles session management.
Frederick Muriuki Muriithi
2024-07-25
Fix typing and linting errors.
Frederick Muriuki Muriithi
2024-07-25
Rename module: qc_app --> uploader
Frederick Muriuki Muriithi
2024-07-22
Handle generic errors for chunked uploads better.
Frederick Muriuki Muriithi
2024-07-05
bug: Return a hashable key, not a dict.
Frederick Muriuki Muriithi
2024-07-02
Call correct method.
Frederick Muriuki Muriithi
2024-07-02
Add URL information to debug information
Frederick Muriuki Muriithi
2024-07-02
Ensure no duplicated values for the query.
Frederick Muriuki Muriithi
2024-07-01
Respond with JSON. Handle error messages on UI.
Frederick Muriuki Muriithi
2024-07-01
Display error better.
test-resumablejs
Frederick Muriuki Muriithi
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