diff options
Diffstat (limited to 'uploader')
| -rw-r--r-- | uploader/phenotypes/views.py | 26 | ||||
| -rw-r--r-- | uploader/templates/phenotypes/bulk-edit-upload.html | 61 | ||||
| -rw-r--r-- | uploader/templates/phenotypes/view-dataset.html | 8 |
3 files changed, 94 insertions, 1 deletions
diff --git a/uploader/phenotypes/views.py b/uploader/phenotypes/views.py index 2f6e926..3d2ff76 100644 --- a/uploader/phenotypes/views.py +++ b/uploader/phenotypes/views.py @@ -932,3 +932,29 @@ def edit_download_phenotype_data(# pylint: disable=[unused-argument] mimetype="text/csv", as_attachment=True, download_name=secure_filename(f"{dataset['Name']}_data")) + + +@phenotypesbp.route( + "<int:species_id>/populations/<int:population_id>/phenotypes/datasets" + "/<int:dataset_id>/edit-upload", + methods=["GET", "POST"]) +@require_login +@with_dataset( + species_redirect_uri="species.populations.phenotypes.index", + population_redirect_uri="species.populations.phenotypes.select_population", + redirect_uri="species.populations.phenotypes.list_datasets") +def edit_upload_phenotype_data(# pylint: disable=[unused-argument] + species: dict, + population: dict, + dataset: dict, + **kwargs +): + if request.method == "GET": + return render_template( + "phenotypes/bulk-edit-upload.html", + species=species, + population=population, + dataset=dataset, + activelink="edit-phenotype") + + return "NOT Implemented: Would do actual edit." diff --git a/uploader/templates/phenotypes/bulk-edit-upload.html b/uploader/templates/phenotypes/bulk-edit-upload.html new file mode 100644 index 0000000..926bcf5 --- /dev/null +++ b/uploader/templates/phenotypes/bulk-edit-upload.html @@ -0,0 +1,61 @@ +{%extends "phenotypes/base.html"%} +{%from "flash_messages.html" import flash_all_messages%} +{%from "macro-table-pagination.html" import table_pagination%} +{%from "populations/macro-display-population-card.html" import display_population_card%} + +{%block title%}Phenotypes{%endblock%} + +{%block pagetitle%}Phenotypes{%endblock%} + +{%block lvl4_breadcrumbs%} +<li {%if activelink=="view-dataset"%} + class="breadcrumb-item active" + {%else%} + class="breadcrumb-item" + {%endif%}> + <a href="{{url_for('species.populations.phenotypes.view_dataset', + species_id=species.SpeciesId, + population_id=population.Id, + dataset_id=dataset.Id)}}">View</a> +</li> +{%endblock%} + +{%block contents%} +<div class="row"> + <p>Upload the edited file you downloaded and edited.</p> +</div> + +<div class="row"> + <form id="frm-bulk-edit-upload" + class="form-horizontal" + method="POST" + action="{{url_for( + 'species.populations.phenotypes.edit_upload_phenotype_data', + species_id=species.SpeciesId, + population_id=population.Id, + dataset_id=dataset.Id)}}" + enctype="multipart/form-data"> + + <div class="form-group row"> + <label for="file-upload-bulk-edit-upload" + class="form-label col-form-label col-sm-2"> + Edited File</label> + <div class="col-sm-10"> + <input id="file-upload-bulk-edit-upload" + name="file_upload_bulk_edit_upload" + class="form-control" + type="file" + required="required" /> + </div> + </div> + + <input type="submit" class="btn btn-primary" + value="upload to edit" /> + + </form> +</div> +{%endblock%} + + +{%block javascript%} +{%endblock%} diff --git a/uploader/templates/phenotypes/view-dataset.html b/uploader/templates/phenotypes/view-dataset.html index e08afc1..21563d6 100644 --- a/uploader/templates/phenotypes/view-dataset.html +++ b/uploader/templates/phenotypes/view-dataset.html @@ -216,7 +216,13 @@ className: "btn btn-info btn-bulk-edit", titleAttr: "Click to upload edited data you got by clicking the `Bulk Edit (Download Data)` button.", action: (event, dt, node, config) => { - alert("Not implemented yet!") + window.location.assign( + `${window.location.protocol}//` + + `${window.location.host}` + + `/species/${species_id}` + + `/populations/${population_id}` + + `/phenotypes/datasets/${dataset_id}` + + `/edit-upload`) } } ] |