diff options
Diffstat (limited to 'uploader/templates/samples/sui-upload-samples.html')
| -rw-r--r-- | uploader/templates/samples/sui-upload-samples.html | 153 |
1 files changed, 0 insertions, 153 deletions
diff --git a/uploader/templates/samples/sui-upload-samples.html b/uploader/templates/samples/sui-upload-samples.html deleted file mode 100644 index 83c2061..0000000 --- a/uploader/templates/samples/sui-upload-samples.html +++ /dev/null @@ -1,153 +0,0 @@ -{%extends "samples/sui-base.html"%} -{%from "flash_messages.html" import flash_all_messages%} - -{%block title%}Samples — Upload Samples{%endblock%} - -{%block breadcrumbs%} -{{super()}} -<li class="breadcrumb-item"> - <a href="{{url_for('species.populations.samples.upload_samples', - species_id=species['SpeciesId'], - population_id=population.Id)}}"> - Upload - </a> -</li> -{%endblock%} - -{%block contents%} -{{flash_all_messages()}} - -<div class="row"> - <form id="form-samples" - method="POST" - action="{{url_for('species.populations.samples.upload_samples', - species_id=species.SpeciesId, - population_id=population.InbredSetId)}}" - enctype="multipart/form-data"> - <legend class="heading">upload samples</legend> - - <input type="hidden" name="species_id" value="{{species.SpeciesId}}" /> - <input type="hidden" name="population_id" value="{{population.Id}}" /> - - <div class="form-group"> - <label for="file-samples" class="form-label">select file</label> - <input type="file" name="samples_file" id="file-samples" - accept="text/csv, text/tab-separated-values, text/plain" - class="form-control" /> - <small class="form-text text-muted"> - See the <a href="#docs-samples-upload">documentation below</a> for - details on expected file format.</small> - </div> - - <div class="form-group"> - <label for="select-separator" class="form-label">field separator</label> - <select id="select-separator" - name="separator" - required="required" - class="form-control"> - <option value="">Select separator for your file: (default is comma)</option> - <option value="	">TAB</option> - <option value=" ">Space</option> - <option value=",">Comma</option> - <option value=";">Semicolon</option> - <option value="other">Other</option> - </select> - <input id="txt-separator" - type="text" - name="other_separator" - class="form-control" /> - <small class="form-text text-muted"> - If you select '<strong>Other</strong>' for the field separator value, - enter the character that separates the fields in your CSV file in the form - field below. - </small> - </div> - - <div class="form-group form-check"> - <input id="chk-heading" - type="checkbox" - name="first_line_heading" - class="form-check-input" /> - <label for="chk-heading" class="form-check-label"> - first line is a heading?</label> - <small class="form-text text-muted"> - Select this if the first line in your file contains headings for the - columns. - </small> - </div> - - <div class="form-group"> - <label for="txt-delimiter" class="form-label">field delimiter</label> - <input id="txt-delimiter" - type="text" - name="field_delimiter" - maxlength="1" - class="form-control" /> - <small class="form-text text-muted"> - If there is a character delimiting the string texts within particular - fields in your CSV, provide the character here. This can be left blank if - no such delimiters exist in your file. - </small> - </div> - - <button type="submit" - class="btn btn-primary">upload samples file</button> - </form> -</div> - -<div class="row"> - <h3>Preview File Content</h3> - - <table id="tbl:samples-preview" class="table"> - <caption class="heading">preview content</caption> - - <thead> - <tr> - <th>Name</th> - <th>Name2</th> - <th>Symbol</th> - <th>Alias</th> - </tr> - </thead> - - <tbody> - <tr id="default-row"> - <td colspan="4"> - Please make some selections in the form above to preview the data.</td> - </tr> - </tbody> - </table> -</div> - - - -<div class="row" id="docs-samples-upload"> - <h3 class="subheading">File Format</h3> - <p> - Upload a <strong>character-separated value (CSV)</strong> file that contains - details about your samples. The CSV file should have the following fields: - <dl> - <dt>Name</dt> - <dd>The primary name/identifier for the sample/individual.</dd> - - <dt>Name2</dt> - <dd>A secondary name for the sample. This can simply be the same as - <strong>Name</strong> above. This field <strong>MUST</strong> contain a - value.</dd> - - <dt>Symbol</dt> - <dd>A symbol for the sample. This can be a strain name, e.g. 'BXD60' for - species that have strains. This field can be left empty for species like - Humans that do not have strains..</dd> - - <dt>Alias</dt> - <dd>An alias for the sample. Can be an empty field, or take on the same - value as that of the Symbol.</dd> - </dl> - </p> -</div> -{%endblock%} - -{%block javascript%} -<script src="/static/js/upload_samples.js" type="text/javascript"></script> -{%endblock%} |