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-rw-r--r--uploader/templates/phenotypes/view-phenotype.html85
1 files changed, 47 insertions, 38 deletions
diff --git a/uploader/templates/phenotypes/view-phenotype.html b/uploader/templates/phenotypes/view-phenotype.html
index 99bb8e5..b42f680 100644
--- a/uploader/templates/phenotypes/view-phenotype.html
+++ b/uploader/templates/phenotypes/view-phenotype.html
@@ -16,7 +16,7 @@
species_id=species.SpeciesId,
population_id=population.Id,
dataset_id=dataset.Id,
- xref_id=xref_id)}}">View Datasets</a>
+ xref_id=xref_id)}}">View Phenotype</a>
</li>
{%endblock%}
@@ -34,51 +34,58 @@
<td>{{phenotype.Post_publication_description or phenotype.Pre_publication_abbreviation or phenotype.Original_description}}
</tr>
<tr>
- <td><strong>Cross-Reference ID</strong></td>
- <td>{{phenotype.xref_id}}</td>
- </tr>
- <tr>
- <td><strong>Collation</strong></td>
+ <td><strong>Database</strong></td>
<td>{{dataset.FullName}}</td>
</tr>
<tr>
<td><strong>Units</strong></td>
<td>{{phenotype.Units}}</td>
</tr>
+ {%for key,value in publish_data.items()%}
+ <tr>
+ <td><strong>{{key}}</strong></td>
+ <td>{{value}}</td>
+ </tr>
+ {%else%}
+ <tr>
+ <td colspan="2" class="text-muted">
+ <span class="glyphicon glyphicon-exclamation-sign"></span>
+ No publication data found.
+ </td>
+ </tr>
+ {%endfor%}
</tbody>
</table>
+ </div>
+</div>
- <form action="#edit-delete-phenotype"
- method="POST"
- id="frm-delete-phenotype">
-
- <input type="hidden" name="species_id" value="{{species.SpeciesId}}" />
- <input type="hidden" name="population_id" value="{{population.Id}}" />
- <input type="hidden" name="dataset_id" value="{{dataset.Id}}" />
- <input type="hidden" name="phenotype_id" value="{{phenotype.Id}}" />
-
- <div class="btn-group btn-group-justified">
- <div class="btn-group">
- {%if "group:resource:edit-resource" in privileges%}
- <input type="submit"
- title="Edit the values for the phenotype. This is meant to be used when you need to update only a few values."
- class="btn btn-primary not-implemented"
- value="edit" />
- {%endif%}
- </div>
- <div class="btn-group"></div>
- <div class="btn-group">
- {%if "group:resource:delete-resource" in privileges%}
- <input type="submit"
- title="Delete the entire phenotype. This is useful when you need to change data for most or all of the fields for this phenotype."
- class="btn btn-danger not-implemented"
- value="delete" />
- {%endif%}
- </div>
- </div>
- </form>
+{%if "group:resource:edit-resource" in privileges
+or "group:resource:delete-resource" in privileges%}
+<div class="row">
+ <div class="btn-group btn-group-justified">
+ <div class="btn-group">
+ {%if "group:resource:edit-resource" in privileges%}
+ <a href="{{url_for('species.populations.phenotypes.edit_phenotype_data',
+ species_id=species.SpeciesId,
+ population_id=population.Id,
+ dataset_id=dataset.Id,
+ xref_id=xref_id)}}"
+ title="Edit the values for the phenotype. This is meant to be used when you need to update only a few values."
+ class="btn btn-primary">Edit</a>
+ {%endif%}
+ </div>
+ <div class="btn-group"></div>
+ <div class="btn-group">
+ {%if "group:resource:delete-resource" in privileges%}
+ <a href="#"
+ title="Delete the entire phenotype. This is useful when you need to change data for most or all of the fields for this phenotype."
+ class="btn btn-danger not-implemented"
+ disabled="disabled">delete</a>
+ {%endif%}
+ </div>
</div>
</div>
+{%endif%}
<div class="row">
<div class="panel panel-default">
@@ -90,9 +97,10 @@
<th>#</th>
<th>Sample</th>
<th>Value</th>
- <th>Symbol</th>
- <th>SE</th>
+ {%if has_se%}
+ <th>SE: {{has_se}}</th>
<th>N</th>
+ {%endif%}
</tr>
</thead>
@@ -102,9 +110,10 @@
<td>{{loop.index}}</td>
<td>{{item.StrainName}}</td>
<td>{{item.value}}</td>
- <td>{{item.Symbol or "-"}}</td>
+ {%if has_se%}
<td>{{item.error or "-"}}</td>
<td>{{item.count or "-"}}</td>
+ {%endif%}
</tr>
{%endfor%}
</tbody>