diff options
Diffstat (limited to 'uploader/phenotypes/models.py')
| -rw-r--r-- | uploader/phenotypes/models.py | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/uploader/phenotypes/models.py b/uploader/phenotypes/models.py index 4a1b2d5..4b8b223 100644 --- a/uploader/phenotypes/models.py +++ b/uploader/phenotypes/models.py @@ -92,7 +92,8 @@ def dataset_phenotypes(conn: mdb.Connection, limit: Optional[int] = None) -> tuple[dict, ...]: """Fetch the actual phenotypes.""" _query = ( - "SELECT pheno.*, pxr.Id AS xref_id, pxr.InbredSetId, ist.InbredSetCode FROM Phenotype AS pheno " + "SELECT pheno.*, pxr.Id AS xref_id, pxr.InbredSetId, ist.InbredSetCode " + "FROM Phenotype AS pheno " "INNER JOIN PublishXRef AS pxr ON pheno.Id=pxr.PhenotypeId " "INNER JOIN PublishFreeze AS pf ON pxr.InbredSetId=pf.InbredSetId " "INNER JOIN InbredSet AS ist ON pf.InbredSetId=ist.Id " @@ -218,7 +219,7 @@ def phenotype_by_id( ).values()) } if bool(_pheno) and len(_pheno.keys()) > 1: - raise Exception( + raise Exception(# pylint: disable=[broad-exception-raised] "We found more than one phenotype with the same identifier!") return None |