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2021-12-20Add guile-sparql to Guix manifest.Arun Isaac
* guix.scm: Add guile-sparql to manifest.
2021-12-20Upgrade ccwl to latest commit.Arun Isaac
* guix.scm (ccwl): Upgrade to commit 51c12b7e58685b70e7cfd9612dac403cf9ee845c.
2021-12-13Upgrade to bleeding edge (ccwl graphviz).Arun Isaac
This fixes a few bugs and brings in new features from (ccwl graphviz). * guix.scm: Import (gnu packages autotools), (guix git-download) and (guix packages). Prefix (gnu packages bioinformatics) imports with guix:. (ccwl): New variable.
2021-12-11Visualize schema.Arun Isaac
* .dir-locals.el (scheme-mode): Indent set-table-columns correctly. * dump.scm: Import (srfi srfi-9 gnu). (%database-name): New variable. (<table>): New type. (tables, string-remove-suffix-ci, human-units, graph->dot, dump-schema): New functions. Invoke dump-schema. * guix.scm: Import (gnu packages bioinformatics). Add ccwl, graphviz and guile-libyaml to the manifest.
2021-12-01Remove dependency on python-rdflib.Arun Isaac
* guix.scm: Remove python-rdflib. (python-berkeleydb, python-rdflib-6): Delete variables.
2021-12-01Replace guix environment with guix shell.Arun Isaac
guix environment is deprecated. * guix.scm: Replace guix environment with guix shell.
2021-11-09Use upstream guile-dbi and guile-dbd-mysql.Arun Isaac
* guix.scm: Do not prefix guix: in importing (gnu packages guile-xyz). (guile-dbi, guile-dbi-bootstrap, guile-dbd-mysql): Delete variables.
2021-09-14Update python-rdflib package.Arun Isaac
* guix.scm: Import (gnu packages dbm), (guix build-system python) and (guix download). (python-berkeleydb, python-rdflib-6): New variables. [mainfest]: Replace python-rdflib with python-rdflib-6. Remove python-urrlib3.
2021-09-14Update guile-dbi package.Arun Isaac
* guix.scm (guile-dbi): Update to 2.1.8. (guile-dbi-bootstrap): Inherit from guile-dbi instead of guix:guile-dbi. Update comments about contributing upstream.
2021-08-27Initial commitArun Isaac