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9 daysAdd url-encoded "/" to gn-files to resolve.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysLink genotype files.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysAdd dna markers and snps.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysAdd marker count.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysClean up genotype transform.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysClean-up phenotype transform.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysMove blank-p to strings.scm.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysUpdate ontology.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysUse correct name for documentation name.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysAdd link to lmdb data.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysRename classification with-documentation name.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysDisplay the locus as a string.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysUpdate phenotypes.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysFix empty phenotypes trait page.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysAdd missing join.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysUpdate phenotypes.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysUpdate phenotypes.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysLink (molecular) dataset to set.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysRemove duplicate.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysRename publication -> publication->metadata.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysUpdate phenotypes.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysMove all ontology to one place.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysDelete duplicated function.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-30Add phenotype dataset metadata.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-30Rename {genotype,molecular-traits}.scm.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-30Update "with-documentation" name.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-30Add gn:dataset->gn:set.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-30Replace gn:genotype->metadata with gn:set->gn:dataset.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Move gnt:has_strain for datasets to datasets.scm.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Rename gn:molecular-traits->gn:datasets.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Delete redundant transform.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Update skos:definition of genechip.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Add datasets.scmMunyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Add gn:genotype->metadata.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Add missing definitions for gnc:has_probeset_data.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Delete genotypes.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Correctly use the correct fields from Datasets table.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Delete duplication in molecular-traits.scm.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Use correct name for gene-chip.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Sanitize rdf string for InbredSet description.Munyoki Kilyungi
Error: classification.ttl:409 - Turtle string error - illegal escape \x (#x78) Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Remove monkey data.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Delete old dataset modelling.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-29Update mRNA datasets.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-28Remodel genechip metadata.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-28Move genechip ontology to own file.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-28Move investigators transform to its own file.Munyoki Kilyungi
* examples/dataset-metadata.scm (investigators): Delete. (option-spec)[investigators]: Delete * transform/strings.scm (fix-email-id, investigator-attributes->id): Move these ... * examples/investigators.scm: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-28classification.scm: Rename transformers.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-28Move fix-email-id/investigator-attributes->id to string.scmMunyoki Kilyungi
* examples/dataset-metadata.scm (fix-email-id, investigator-attributes->id): Move this ... * transform/strings.scm: here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-28Correctly use molecular_trait.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-28Rename things.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>