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Data transformers for GeneNetwork (particularly to RDF)
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2024-10-08
Re-model NCBI tranform.
Munyoki Kilyungi
2024-09-12
Re-introduce unique identifiers for RIF metadata.
Munyoki Kilyungi
2024-09-12
Remove extra nodes for symbols.
Munyoki Kilyungi
2024-09-12
Add extra annotations for gene symbols.
Munyoki Kilyungi
2024-09-09
Use "rdfs:label" to represent human readable format of WIKI.
Munyoki Kilyungi
2024-09-06
Use predicateObject Lists with a blank-node to model GeneRIF.
Munyoki Kilyungi
2024-08-28
Replace blank-nodes for gn-genewiki-entries with unique identifiers.
Munyoki Kilyungi
2024-08-16
Correctly check for the initial when transforming GeneRIF.
Munyoki Kilyungi
2024-08-16
Transform VersionIds in geneWiki transform correctly.
Munyoki Kilyungi
2024-08-16
Delete un-used functions during generif transform.
Munyoki Kilyungi
2024-08-14
Correctly check for blank string in GeneRIF.initial.
Munyoki Kilyungi
2024-08-14
Remove Investigators from GeneRIF join.
Munyoki Kilyungi
2024-08-14
Apply formatting.
Munyoki Kilyungi
2024-08-14
Add email to WIKI transform.
Munyoki Kilyungi
2024-08-14
Replace [] with () in let* form.
Munyoki Kilyungi
2024-08-14
Remove 'gene: ontology from GeneId prefix.
Munyoki Kilyungi
2024-08-14
Make symbol field a multiset in probeset transform.
Munyoki Kilyungi
2024-08-14
Add missing RDF prefix during ProbeSet transform.
Munyoki Kilyungi
2024-07-30
Update GeneRIF metadata with "reason" for modification.
Munyoki Kilyungi
2024-07-30
Add "gnt:initial" to GeneRIF metadata comments.
Munyoki Kilyungi
2024-07-30
Update GeneRIF metadata to contain "dct:identifier" for each comment.
Munyoki Kilyungi
2024-07-30
Use correct term for RIF id and annotate it with an int.
Munyoki Kilyungi
2024-07-30
Update GeneRIF metadata to contain the version-id.
Munyoki Kilyungi
2024-07-19
Add comment.
Munyoki Kilyungi
2024-07-15
Add missing RIF symbols.
Munyoki Kilyungi
2024-05-20
Add pointers to git metadata in RDF for the dataset metadata.
Munyoki Kilyungi
2024-05-15
Use a set to represent a phenotype's owner.
Munyoki Kilyungi
2024-05-15
Replace rdfs:label with gnt:traitId for Phenotypes.
Munyoki Kilyungi
2024-02-15
Refactor how changes are committed and pushed.
Munyoki Kilyungi
2024-02-15
Remove call to string-append when defining dir-name local var.
Munyoki Kilyungi
2024-02-15
Filter out files that only have "None".
Munyoki Kilyungi
2024-02-14
Capitalize the first string of every path.
Munyoki Kilyungi
2024-02-13
Convert extra dataset metadata to text-files.
Munyoki Kilyungi
2024-02-13
Remove more fields from dataset's RDF output.
Munyoki Kilyungi
2024-02-13
Fix missplaced parens.
Munyoki Kilyungi
2024-02-09
Re-add triplets that describe dataset terms.
Munyoki Kilyungi
2024-02-09
Update push and reset git commands.
Munyoki Kilyungi
2024-02-09
Use correct path to the datasets directory.
Munyoki Kilyungi
2024-02-08
Delete rdf triplets from dataset transform.
Munyoki Kilyungi
2024-02-08
Add method for commiting changes to the gn-docs git repo.
Munyoki Kilyungi
2024-02-08
Delete unused variable in the getopts arglist.
Munyoki Kilyungi
2024-02-08
Fix typo.
Munyoki Kilyungi
2024-02-08
Fix how the dataset directory is constructed.
Munyoki Kilyungi
2024-02-08
Remove "string->identifier" for the dataset directory name.
Munyoki Kilyungi
2024-02-08
Use correct format string literal when printing out sql results.
Munyoki Kilyungi
2024-02-08
Update local git-repo directory.
Munyoki Kilyungi
2024-02-08
Add a basic guile script to transform stored rtf data to files.
Munyoki Kilyungi
2024-01-08
Add InfoFiles.Experiment_Type metadata.
Munyoki Kilyungi
2024-01-05
Correct formatting for the gnt:location predicate for ProbeSets.
Munyoki Kilyungi
2023-12-22
Fix typo with pantherLink ResourceLink.
Munyoki Kilyungi
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