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Data transformers for GeneNetwork (particularly to RDF)
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dump-phenotype.scm
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Author
2023-08-21
Move dumps related to datasets to one place
Munyoki Kilyungi
2023-08-21
Rename inbredSet -> set
Munyoki Kilyungi
2023-08-19
Add traitName
Munyoki Kilyungi
2023-08-19
Point ttl path to /export/data/genenetwork-virtuoso/
Munyoki Kilyungi
2023-08-19
Rename inbredSet identifier
Munyoki Kilyungi
2023-08-17
Update how phenotypes are transformed
Munyoki Kilyungi
2023-08-15
Introduce phenotype/genotype/probeset Dataset as a category
Munyoki Kilyungi
2023-08-15
Dump publishfreeze data
Munyoki Kilyungi
2023-08-09
Update how phenotypes are dumped
Munyoki Kilyungi
2023-08-07
Update phenotype and publishfreeze dump
Munyoki Kilyungi
2023-08-07
Update publish-freeze dump
Munyoki Kilyungi
2023-08-07
Update how published datasets are dumped
Munyoki Kilyungi
2023-07-31
Add gnc: prefix
Munyoki Kilyungi
2023-07-31
Replace "gn-term" with "gnt" prefix
Munyoki Kilyungi
2023-07-21
Update phenotype dump
Munyoki Kilyungi
2023-07-21
Use "gn:" and "gn-term:" when dumping phenotypes
Munyoki Kilyungi
2023-07-21
Dump phenotypes with documentation.
Munyoki Kilyungi
2023-06-12
Use PublishFreeze Name as a fallback for InfoPageName
Munyoki Kilyungi
2023-06-12
Annotate a phenotype dataset with 'dataset:
Munyoki Kilyungi
2023-06-12
Annotate publications without a pmid with "unpublished"
Munyoki Kilyungi
2023-06-12
Use "publication:" as an identifier for publications
Munyoki Kilyungi
2023-06-12
Use NCBI taxonomy browser instead of uniprot
Munyoki Kilyungi
2023-06-12
Make ((g/ph)enotype/probeset)Dataset subset of Dataset
Munyoki Kilyungi
2023-05-30
Only dump public data
Munyoki Kilyungi
2023-05-26
Use a phenotype's abbreviation as it's name
Munyoki Kilyungi
2023-05-26
Return an empty string if a dataset doesn't have a name
Munyoki Kilyungi
2023-05-26
Update a dataset's subject identifier to be a gn url
Munyoki Kilyungi
2023-05-26
Annotate createtime field correctly with xsd:date
Munyoki Kilyungi
2023-05-26
Replace dump.scm with separete dumps for several tables
Munyoki Kilyungi