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2021-12-01Remove gn:geoSeries when value starts with "No Geo Series...".•••* dump.scm (dump-info-files): Remove gn:geoSeries when value starts with "No Geo Series...". Arun Isaac
2021-12-01In the gn: prefix, use http instead of https.•••* dump.scm: In the gn:prefix, use http instead of https. Arun Isaac
2021-12-01Remove dependency on python-rdflib.•••* guix.scm: Remove python-rdflib. (python-berkeleydb, python-rdflib-6): Delete variables. Arun Isaac
2021-12-01Replace guix environment with guix shell.•••guix environment is deprecated. * guix.scm: Replace guix environment with guix shell. Arun Isaac
2021-12-01Remove unrequired rdfs: prefix.•••* dump.scm: Remove rdfs: prefix. Arun Isaac
2021-11-11Fix unbalanced parentheses.•••Parentheses became unbalanced due to my careless git use. * dump.scm: Fix unbalanced parentheses. Arun Isaac
2021-11-09Use upstream guile-dbi and guile-dbd-mysql.•••* guix.scm: Do not prefix guix: in importing (gnu packages guile-xyz). (guile-dbi, guile-dbi-bootstrap, guile-dbd-mysql): Delete variables. Arun Isaac
2021-09-14Dump InfoFiles.•••* dump.scm (dump-info-files): New function. [main]: Call dump-info-files. Arun Isaac
2021-09-14Abstract out deleting substrings.•••* dump.scm (delete-substrings): New function. (dump-publication): Replace string-replace-substring with delete-substrings. Arun Isaac
2021-09-14Update python-rdflib package.•••* guix.scm: Import (gnu packages dbm), (guix build-system python) and (guix download). (python-berkeleydb, python-rdflib-6): New variables. [mainfest]: Replace python-rdflib with python-rdflib-6. Remove python-urrlib3. Arun Isaac
2021-09-14Update guile-dbi package.•••* guix.scm (guile-dbi): Update to 2.1.8. (guile-dbi-bootstrap): Inherit from guile-dbi instead of guix:guile-dbi. Update comments about contributing upstream. Arun Isaac
2021-09-14Do not define sub-properties of rdfs:label.•••* dump.scm (dump-publication, dump-tissue): Do not define any property to be a sub-property of rdfs:label. Arun Isaac
2021-09-14Dump GeneChip.•••* dump.scm (gene-chip-name->id, dump-gene-chip): New functions. [main]: Call dump-gene-chip. Arun Isaac
2021-09-14Dump AvgMethod.•••* dump.scm (avg-method-name->id, dump-avg-method): New functions. [main]: Call dump-avg-method. Arun Isaac
2021-09-14Delete unused camel->kebab function.•••* dump.scm (camel->kebab): Delete function. Arun Isaac
2021-09-09Dump Investigators.•••* dump.scm (fix-email-id, investigator-email->id, dump-investigators): New functions. Invoke dump-investigators. Arun Isaac
2021-09-09Dump Tissue.•••* dump.scm (tissue-short-name->id, dump-tissue): New functions. Invoke dump-tissue. Arun Isaac
2021-09-09Add foaf prefix.•••* dump.scm: Add foaf prefix. Arun Isaac
2021-09-09Abstract out prefix entries.•••* dump.scm (prefix): New function. Use prefix. Arun Isaac
2021-08-27Initial commitArun Isaac