aboutsummaryrefslogtreecommitdiff
path: root/examples/strains.scm
diff options
context:
space:
mode:
Diffstat (limited to 'examples/strains.scm')
-rwxr-xr-xexamples/strains.scm10
1 files changed, 3 insertions, 7 deletions
diff --git a/examples/strains.scm b/examples/strains.scm
index 44a0e87..5ef6f03 100755
--- a/examples/strains.scm
+++ b/examples/strains.scm
@@ -76,14 +76,10 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used.
(regexp-substitute/global
#f "[^A-Za-z0-9:]"
(field Strain Name)
- 'pre "_" 'post)
- #:separator ""
- #:proc string-capitalize-first)
+ 'pre "_" 'post))
(set rdf:type 'gnc:strain)
(set xkos:classifiedUnder
- (string->identifier "" (remap-species-identifiers (field Species Fullname))
- #:separator ""
- #:proc string-capitalize-first))
+ (string->identifier "" (remap-species-identifiers (field Species Fullname))))
;; Name, and maybe a second name
(set rdfs:label (sanitize-rdf-string (field Strain Name)))
(set skos:altLabel (sanitize-rdf-string (field ("IF ((Strain.Name2 != Strain.Name), Strain.Name2, '')" Name2))))
@@ -140,7 +136,7 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used.
("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
("taxon:" "<http://purl.uniprot.org/taxonomy/>")))
(inputs
- (list inbred-set species strain mapping-method avg-method))
+ (list strain mapping-method avg-method))
(outputs
`(#:documentation ,documentation
#:rdf ,output))))