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-rwxr-xr-xexamples/dump-probeset-metadata.scm20
1 files changed, 10 insertions, 10 deletions
diff --git a/examples/dump-probeset-metadata.scm b/examples/dump-probeset-metadata.scm
index 6da1eb0..ddbea5e 100755
--- a/examples/dump-probeset-metadata.scm
+++ b/examples/dump-probeset-metadata.scm
@@ -24,14 +24,14 @@
"WHERE ProbeSetFreeze.public > 0 AND ProbeSetFreeze.confidentiality < 1")
(schema-triples
(gn:probesetData rdfs:range gn:probeset)
- (gn-term:hasProbeset rdfs:range rdfs:Literal))
+ (gnt:hasProbeset rdfs:range rdfs:Literal))
(triples
(string->identifier
"probesetData"
(field ("CONCAT(ProbeSetFreeze.Name,':',IFNULL(ProbeSet.Name, ProbeSet.Id))"
ProbeSetName)))
(set rdf:type 'gn:probesetData)
- (set gn-term:hasProbeset
+ (set gnt:hasProbeset
(ontology
'probeset:
(regexp-substitute/global
@@ -39,34 +39,34 @@
(field ("IFNULL(ProbeSet.Name, ProbeSet.Id)"
name))
'pre "_" 'post)))
- (set gn-term:probesetOfDataset
+ (set gnt:probesetOfDataset
(ontology
'probeset:
(regexp-substitute/global #f "[^A-Za-z0-9:]"
(field ProbeSetFreeze Name)
'pre "_" 'post)))
- (set gn-term:mean
+ (set gnt:mean
(annotate-field
(field ("IFNULL(ProbeSetXRef.mean, '')" mean))
'^^xsd:double))
- (set gn-term:se
+ (set gnt:se
(annotate-field
(field ("IFNULL(ProbeSetXRef.se, '')" se))
'^^xsd:double))
- (set gn-term:locus (field ProbeSetXRef Locus))
+ (set gnt:locus (field ProbeSetXRef Locus))
(set gn:LRS
(annotate-field
(field ("IFNULL(ProbeSetXRef.LRS, '')" LRS))
'^^xsd:double))
- (set gn-term:pValue
+ (set gnt:pValue
(annotate-field
(field ("IFNULL(ProbeSetXRef.pValue, '')" pValue))
'^^xsd:double))
- (set gn-term:additive
+ (set gnt:additive
(annotate-field
(field ("IFNULL(ProbeSetXRef.additive, '')" additive))
'^^xsd:double))
- (set gn-term:h2
+ (set gnt:h2
(annotate-field
(field ("IFNULL(ProbeSetXRef.h2, '')" h2))
'^^xsd:float))))
@@ -79,7 +79,7 @@
(table-metadata? #f)
(prefixes
'(("gn:" "<http://genenetwork.org/id/>")
- ("gn-term:" "<http://genenetwork.org/id/>")
+ ("gnt:" "<http://genenetwork.org/id/>")
("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
("xsd:" "<http://www.w3.org/2001/XMLSchema#>")))