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| author | Munyoki Kilyungi | 2026-04-20 10:12:30 +0300 |
|---|---|---|
| committer | Munyoki Kilyungi | 2026-04-20 10:12:30 +0300 |
| commit | b0ef58eaff0e5966dc1dafc6abba8e42e3db1fe2 (patch) | |
| tree | 93a32a0727513d7e770c269777c0aa12cb8336d1 | |
| parent | 7f7272be9e0c43a2b80ccecb4055cec58b888514 (diff) | |
| download | gn-transform-databases-master.tar.gz | |
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| -rwxr-xr-x | examples/phenotype.scm | 5 | ||||
| -rwxr-xr-x | examples/probesets-experiment-metadata.scm | 7 |
2 files changed, 12 insertions, 0 deletions
diff --git a/examples/phenotype.scm b/examples/phenotype.scm index 57fd2c5..70deed7 100755 --- a/examples/phenotype.scm +++ b/examples/phenotype.scm @@ -86,6 +86,11 @@ (set owl:equivalentClass (field ("CONCAT(PublishFreeze.Name, '_', PublishXRef.Id)" PublishFreeze))) + (set gnt:has_trait_page + (string->symbol + (format #f "<https://genenetwork.org/show_trait?trait_id=~a&dataset=~a>" + (field PublishXRef Id) + (field PublishFreeze Name)))) (set dcat:distribution (string->symbol (format #f "gnd:~a.json" diff --git a/examples/probesets-experiment-metadata.scm b/examples/probesets-experiment-metadata.scm index 83a8ead..4bab425 100755 --- a/examples/probesets-experiment-metadata.scm +++ b/examples/probesets-experiment-metadata.scm @@ -30,6 +30,13 @@ ;; (format #f "gnd:~a.json" ;; (field ("CONCAT(ProbeSetFreeze.Name, '_', ProbeSet.Name)" ;; PublishFreeze))))) ) + (set gnt:has_trait_page + (string->symbol + (format #f "<https://genenetwork.org/show_trait?trait_id=~a&dataset=~a>" + (field ProbeSet Name) + ;; GTEx_Lung _0414 + (uri-encode + (field ProbeSetFreeze Name ProbeSetFreezeName))))) (set gnt:has_probeset (string->identifier "probeset" (field ProbeSet Name ProbeSetName))) (set dcat:isPartOf (string->identifier "dataset" (field ProbeSetFreeze Name ProbeSetFreezeName) #:separator "_")) |