From f97257e80629cc79fd96bd5a4f000e85fee74819 Mon Sep 17 00:00:00 2001
From: Efraim Flashner
Date: Sun, 7 Nov 2021 08:50:02 +0000
Subject: rn6app: configure guix channels

---
 rn6app-channels.scm | 16 ++++++++++++++++
 run_rn6app.sh       |  2 +-
 2 files changed, 17 insertions(+), 1 deletion(-)
 create mode 100644 rn6app-channels.scm

diff --git a/rn6app-channels.scm b/rn6app-channels.scm
new file mode 100644
index 0000000..5700c79
--- /dev/null
+++ b/rn6app-channels.scm
@@ -0,0 +1,16 @@
+(list
+  (channel
+    (name 'gn-bioinformatics)
+    (url "http://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics")
+    (commit
+     "a81fa9577474254cbf99105ac4ec9b10d7ccf0dd"))
+  (channel
+    (name 'guix)
+    (url "https://git.savannah.gnu.org/git/guix.git")
+    (commit
+     "5e5bcba29576698fe50bcf9cc8e4de2576583d2d")
+    (introduction
+      (make-channel-introduction
+	"9edb3f66fd807b096b48283debdcddccfea34bad"
+	(openpgp-fingerprint
+	  "BBB0 2DDF 2CEA F6A8 0D1D  E643 A2A0 6DF2 A33A 54FA")))))
diff --git a/run_rn6app.sh b/run_rn6app.sh
index 46343a6..1af5395 100755
--- a/run_rn6app.sh
+++ b/run_rn6app.sh
@@ -1,2 +1,2 @@
 #!/bin/sh
-/var/guix/profiles/per-user/shepherd/current-guix/bin/guix environment --ad-hoc rn6-assembly-error-app -- sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ rn6-assembly-error-app'
+/home/shepherd/guix-profiles/rn6app/bin/guix environment --ad-hoc rn6-assembly-error-app -- sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ rn6-assembly-error-app'
-- 
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