From 0328b5a2071d991db71dba1295d213160caa7863 Mon Sep 17 00:00:00 2001
From: Shepherd on Tux02
Date: Fri, 22 Nov 2024 05:00:26 -0600
Subject: Modernize guix invocation with shell - it is broken still

---
 run_singlecell.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/run_singlecell.sh b/run_singlecell.sh
index 10f9b31..5ca8f78 100755
--- a/run_singlecell.sh
+++ b/run_singlecell.sh
@@ -2,5 +2,5 @@
 # /home/shepherd/guix-profiles/singlecell/bin/guix download https://bioconductor.org/packages/3.11/bioc/src/contrib/multtest_2.44.0.tar.gz
 # /home/shepherd/guix-profiles/singlecell/bin/guix environment --ad-hoc singlecellrshiny -- sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ singlecellrshiny'
 
-/home/wrk/opt/guix-pull-5-link/bin/guix shell singlecellrshiny -- sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ singlecellrshiny'
+/home/wrk/opt/guix-pull-5-link/bin/guix shell --root=? singlecellrshiny -- sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ singlecellrshiny'
 
-- 
cgit 1.4.1