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#! /bin/bash -e
# qa-deploy.sh --- Guix configuration for genenetwork machines LLM
# instance
# Copyright © 2024 Munyoki Kilyungi <me@bonfacemunyoki.com>
# Copyright © 2024 Alexander Kabui <alexanderkabua@gmail.com>
# Copyright © 2024 John Nduli <rookie101@jnduli.co.ke>
#
# This file is part of genenetwork-machines.
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Foundation; either version 3
# of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
# Build and install qa container on tux02.
SCRIPTARGS=("$@")
MODULEARGS=()
if [ "${#SCRIPTARGS[@]}" -gt 0 ]
then
echo "===== Auxilliary module load paths ====="
for path in "${SCRIPTARGS[@]}"
do
echo "-L ${path}"
MODULEARGS+=("-L" "${path}")
done
echo "===== END: Auxilliary module load paths ====="
fi
container_script=$(guix system container \
"${MODULEARGS[@]}" \
--network \
--load-path=. \
--verbosity=3 \
--share=/export2/guix-containers/genenetwork/gn-qa/var/genenetwork=/var/genenetwork \
--share=/export2/guix-containers/genenetwork/gn-qa/var/lib/acme=/var/lib/acme \
--share=/export2/guix-containers/genenetwork/gn-qa/var/lib/mysql=/var/lib/mysql \
--share=/export2/guix-containers/genenetwork/gn-qa/var/lib/virtuoso=/var/lib/virtuoso \
--share=/export2/guix-containers/genenetwork/gn-qa/var/log=/var/log \
--share=/export2/guix-containers/genenetwork/gn-qa/var/ssl=/var/ssl \
--share=/export2/guix-containers/genenetwork/gn-qa/etc/genenetwork=/etc/genenetwork \
--expose=/export/data/genenetwork-xapian/=/export/data/genenetwork-xapian \
--share=/export/data/gn-qa/genenetwork-sqlite=/export/data/genenetwork-sqlite \
--expose=/export/data/genenetwork/genotype_files=/export/data/genenetwork/genotype_files \
--share=/export/data/gn-qa/genenetwork3=/export/data/genenetwork3 \
--share=/export/data/gn-qa/gn-uploader \
--share=/var/run/mysqld3307=/run/mysqld \
qa-gn.scm)
echo "${container_script}"
sudo ln --force --symbolic "${container_script}" /usr/local/bin/gn-qa-container
sudo ln --force --symbolic /usr/local/bin/gn-qa-container /var/guix/gcroots
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