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2024-03-02Restore default auth database path on production.Arun Isaac
* production.scm (operating-system)[services]{genenetwork-service-type}: Remove auth-db field. * production-deploy.sh (container_script): Mount /var/genenetwork.
2024-03-01Set ownership of secrets files.Arun Isaac
* genenetwork/services/genenetwork.scm (genenetwork-activation): Set ownership of secrets files. * production-deploy.sh: Mount secrets files read-write.
2024-01-09Add "=" before --load-path argument value.Arun Isaac
guix requires "=" between argument names and values. * production-deploy.sh: Add "=" before --load-path argument value.
2024-01-03Add GeneNetwork service to production container.Arun Isaac
* production.scm: Import (genenetwork services genenetwork), (forge acme), (forge nginx) and (forge socket). Import shepherd from (gnu packages admin). (operating-system)[sudoers-file]: Allow acme user to restart nginx. (services): Add forge-nginx, acme and genenetwork services.
2023-01-02Register containers as garbage collector roots.Arun Isaac
We don't want the Guix garbage collector accidentally clearing away store items required by the container. So, register them as garbage collector roots. * genenetwork-development-deploy.sh, production-deploy.sh, public-sparql-deploy.sh, virtuoso-deploy.sh: Register containers as garbage collector roots.
2022-12-10Move guix container state to /export2.Arun Isaac
We prefer /export2 to house really large data. * genenetwork-development-deploy.sh, production-deploy.sh, public-sparql-deploy.sh, virtuoso-deploy.sh: Move guix container state to /export2.
2022-08-29Run mysql server in production.Arun Isaac
* production.scm: Import (gnu services databases). (operating-system)[services]: Add mysql-service-type. * production-deploy.sh: Share mysql directory with container.
2022-08-29Run production in separate network namespace.Arun Isaac
The production container need interact with the outside world only through a single Unix socket file on which the GeneNetwork web server listens. Hide all other interfaces to it. * production-deploy.sh (container_script): Remove --network flag.
2022-08-25Add production container.Arun Isaac
* production-deploy.sh, production.scm: New files.