gn-machines - Guix configuration for genenetwork machines

Age	Commit message (Expand)	Author
2023-09-27	Revert "Expose config file to pola-wrapper"	Frederick Muriuki Muriithi
2023-09-20	Expose config file to pola-wrapper	Frederick Muriuki Muriithi
2023-09-20	Expose configurations directory to pola-wrapper.	Frederick Muriuki Muriithi
2023-09-20	Set the envvar in the gexp	Frederick Muriuki Muriithi
2023-09-20	Pass "secrets" configurations to GN2	Frederick Muriuki Muriithi
2023-09-19	Use appropriate mypy for Python3.10	Frederick Muriuki Muriithi
2023-09-19	Add missing `gn-auth-repository` configuration	Frederick Muriuki Muriithi
2023-09-16	Add CI/CD definitions for gn-auth	Frederick Muriuki Muriithi
2023-09-11	sed /s/dump-genenetwork/transform-genenetwork/g.	Munyoki Kilyungi
2023-09-11	sed /s/dump-genenetwork/transform-genenetwork/g.	Munyoki Kilyungi
2023-09-11	Update the repo-url for transforming genenetwork databases.	Munyoki Kilyungi
2023-09-05	Use correct name for python-mypy	Munyoki Kilyungi
2023-09-05	Use mypy defined in guix-bioinformatics	Munyoki Kilyungi
2023-09-04	Use self-hosted git repo	Munyoki Kilyungi
2023-09-04	Use self-hosted GN repository	Munyoki Kilyungi
2023-08-10	Set up cgit service.	Arun Isaac
2023-08-10	Switch to the forge-nginx and ACME services.	Arun Isaac
2023-07-19	Use tissue from guix-forge.	Arun Isaac
2023-07-19	Disable verbose build logs for guix-bioinformatics job.	Arun Isaac
2023-07-19	Use guix-channel-job-gexp for genenetwork3 tests.	Arun Isaac
2023-07-19	Add guix-bioinformatics CI job.	Arun Isaac
2023-07-11	Revert "Disable tests"	Munyoki Kilyungi
2023-07-10	Revert "Fix genotype file path"	Munyoki Kilyungi
2023-07-10	Fix genotype file path	Munyoki Kilyungi
2023-07-10	Disable tests	Munyoki Kilyungi
2023-06-26	Add virtuoso allowed dirs	Munyoki Kilyungi
2023-06-15	Increase threshold for number-of-buffers and maximum-dirty-buffers.	Munyoki Kilyungi
2023-06-08	Share auth-db-path with genenetwork3-pola-wrapper.	Frederick Muriuki Muriithi
2023-06-06	Set AUTH_DB, not AUTH_DB_PATH.	Frederick Muriuki Muriithi
2023-05-31	Do not create xapian build directory.	Arun Isaac
2023-05-31	Use an absolute GN_SERVER_URL.	Frederick Muriuki Muriithi
2023-05-31	Add trailing slash to GN_SERVER_URL.	Frederick Muriuki Muriithi
2023-05-05	Run migrations after tests and before restarting genenetwork3.	Frederick Muriuki Muriithi
2023-04-12	Run tissue on an IP socket.	Arun Isaac
2023-04-12	Disable libgit2 repository ownership validation.	Arun Isaac
2023-04-11	Use tissue package from Guix upstream.	Arun Isaac
2023-04-11	Provide MySQL URI to the xapian indexing script.	Frederick Muriuki Muriithi
2023-02-09	Share the mysqld socket directory into the container.	Arun Isaac
2023-01-18	Add data directory to genenetwork configuration.	Arun Isaac
2023-01-18	Move xapian directory.	Arun Isaac
2023-01-08	Clean up xapian build directory if previous build failed to.	Arun Isaac
2023-01-05	Create custom 502 error page for CD.	Arun Isaac
2022-12-22	Build and install xapian index nightly.	Arun Isaac
2022-12-22	Separate out sudo into a variable.	Arun Isaac
2022-12-22	gn3: tests: Update the tests invocation	Frederick Muriuki Muriithi
2022-11-10	Configure SPARQL endpoint of genenetwork3 server.	Arun Isaac
2022-11-07	Move CD virtuoso ports to 90*.	Arun Isaac
2022-11-04	Import GeneRIF by calling the unified dump script.	Arun Isaac
2022-10-31	Find GeneRIF data in root of export directory.	Arun Isaac
2022-10-31	Use guile-zlib in dump-genenetwork-database CI job.	Arun Isaac