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Guix configuration for genenetwork machines
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3 days
Run script to make non-human data public
Frederick Muriuki Muriithi
3 days
Setup public sparql endpoint in container.
Frederick Muriuki Muriithi
8 days
Explicitly name virtuoso's database files.
Frederick Muriuki Muriithi
9 days
Do not share auth-db with genenetwork3 gunicorn app.
Frederick Muriuki Muriithi
9 days
Specify path to LLM database in production.
Frederick Muriuki Muriithi
9 days
Add llm-db-path field to genenetwork configuration..
Frederick Muriuki Muriithi
9 days
Remove obsolete SSL key configuration.
Frederick Muriuki Muriithi
9 days
Enable AI search in genenetwork service.
Frederick Muriuki Muriithi
9 days
Add additional virtuso configuration.
Frederick Muriuki Muriithi
14 days
Move production to tux04.
Frederick Muriuki Muriithi
14 days
Add GN3 alias server to genenetwork service.
Frederick Muriuki Muriithi
14 days
Add sanitizer for log-level configuration field.
Arun Isaac
14 days
Make <gn-uploader-configuration> log-level a symbol.
Arun Isaac
14 days
Re-format and improve indentation.
Arun Isaac
14 days
Regularize <gn-uploader-configuration> getter functions.
Arun Isaac
14 days
Add log-level field to genenetwork-configuration.
Frederick Muriuki Muriithi
14 days
Set REAPER_COMMAND in gn3.conf.
Frederick Muriuki Muriithi
14 days
Set GENOTYPE_FILES in gn3.conf.
Frederick Muriuki Muriithi
2024-10-18
Move directory permissions setting G-exp into separate variable.
Arun Isaac
2024-10-18
Provide UTF-8 locale so characters are encoded correctly.
Munyoki Kilyungi
2024-10-18
Explicitly set AUTH_SERVER_URL in gn3.conf.
Munyoki Kilyungi
2024-10-18
Upgrade slurm to 24.05.3.
Arun Isaac
2024-10-02
Update server root for gn-uploader.
Frederick Muriuki Muriithi
2024-10-02
Update path to genotype files.
Frederick Muriuki Muriithi
2024-09-12
Enable AI Search in GN2 CD.
Munyoki Kilyungi
2024-09-03
Configure slurm with --with-yaml.
Arun Isaac
2024-08-29
Install slurmrestd too.
Arun Isaac
2024-08-29
Add slurm deployment scripts for octopus.
Arun Isaac
2024-08-29
Use http-parser from Guix.
Arun Isaac
2024-08-13
Forward the scheme to the client to generate correct URIs.
Frederick Muriuki Muriithi
2024-08-13
Update docs
Frederick Muriuki Muriithi
2024-08-13
gn-uploader: Configure link to GN2 server.
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Add `AUTH_SERVER_URL` to the configurations.
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Update ENVVAR name
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Update configuration variable name.
Frederick Muriuki Muriithi
2024-08-06
Give access to read TTL from the /var/lib/virtuoso directory.
Frederick Muriuki Muriithi
2024-07-22
gn-uploader: use `gn-uploader-configuration` as default.
Frederick Muriuki Muriithi
2024-07-22
gn-uploader: make app user owner of upload directory tree
Frederick Muriuki Muriithi
2024-07-12
Update configurations.
Frederick Muriuki Muriithi
2024-07-12
Make the container's /var/log directory available on host
Frederick Muriuki Muriithi
2024-07-12
Indicate environment in container hostnames
Frederick Muriuki Muriithi
2024-07-12
Add virtuoso to uploader.
Frederick Muriuki Muriithi
2024-07-12
Extend the genenetwork-service-type with the mcron indexer service
Frederick Muriuki Muriithi
2024-07-12
Make xapian directory writable inside container.
Frederick Muriuki Muriithi
2024-07-12
Generalise index-genenetwork cron gexp
Frederick Muriuki Muriithi
2024-06-28
Add tux04 slurm deployment.
Arun Isaac
2024-06-28
Make secrets dirs writable by relevant services.
Frederick Muriuki Muriithi
2024-06-28
Remove duplicated, and wrong settings.
Frederick Muriuki Muriithi
2024-06-28
Fix permissions: Only files are read-only
Frederick Muriuki Muriithi
2024-06-28
Make relevant services available to each service.
Frederick Muriuki Muriithi
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