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AgeCommit message (Expand)Author
2024-11-04Run script to make non-human data publicFrederick Muriuki Muriithi
2024-11-04Setup public sparql endpoint in container.Frederick Muriuki Muriithi
2024-10-30Explicitly name virtuoso's database files.Frederick Muriuki Muriithi
2024-10-29Do not share auth-db with genenetwork3 gunicorn app.Frederick Muriuki Muriithi
2024-10-29Specify path to LLM database in production.Frederick Muriuki Muriithi
2024-10-29Add llm-db-path field to genenetwork configuration..Frederick Muriuki Muriithi
2024-10-29Remove obsolete SSL key configuration.Frederick Muriuki Muriithi
2024-10-29Enable AI search in genenetwork service.Frederick Muriuki Muriithi
2024-10-29Add additional virtuso configuration.Frederick Muriuki Muriithi
2024-10-24Move production to tux04.Frederick Muriuki Muriithi
2024-10-24Add GN3 alias server to genenetwork service.Frederick Muriuki Muriithi
2024-10-24Add sanitizer for log-level configuration field.Arun Isaac
2024-10-24Make <gn-uploader-configuration> log-level a symbol.Arun Isaac
2024-10-24Re-format and improve indentation.Arun Isaac
2024-10-24Regularize <gn-uploader-configuration> getter functions.Arun Isaac
2024-10-24Add log-level field to genenetwork-configuration.Frederick Muriuki Muriithi
2024-10-24Set REAPER_COMMAND in gn3.conf.Frederick Muriuki Muriithi
2024-10-24Set GENOTYPE_FILES in gn3.conf.Frederick Muriuki Muriithi
2024-10-18Move directory permissions setting G-exp into separate variable.Arun Isaac
2024-10-18Provide UTF-8 locale so characters are encoded correctly.Munyoki Kilyungi
2024-10-18Explicitly set AUTH_SERVER_URL in gn3.conf.Munyoki Kilyungi
2024-10-18Upgrade slurm to 24.05.3.Arun Isaac
2024-10-02Update server root for gn-uploader.Frederick Muriuki Muriithi
2024-10-02Update path to genotype files.Frederick Muriuki Muriithi
2024-09-12Enable AI Search in GN2 CD.Munyoki Kilyungi
2024-09-03Configure slurm with --with-yaml.Arun Isaac
2024-08-29Install slurmrestd too.Arun Isaac
2024-08-29Add slurm deployment scripts for octopus.Arun Isaac
2024-08-29Use http-parser from Guix.Arun Isaac
2024-08-13Forward the scheme to the client to generate correct URIs.Frederick Muriuki Muriithi
2024-08-13Update docsFrederick Muriuki Muriithi
2024-08-13gn-uploader: Configure link to GN2 server.Frederick Muriuki Muriithi
2024-08-07gn-uploader: Add `AUTH_SERVER_URL` to the configurations.Frederick Muriuki Muriithi
2024-08-07gn-uploader: Update ENVVAR nameFrederick Muriuki Muriithi
2024-08-07gn-uploader: Update configuration variable name.Frederick Muriuki Muriithi
2024-08-06Give access to read TTL from the /var/lib/virtuoso directory.Frederick Muriuki Muriithi
2024-07-22gn-uploader: use `gn-uploader-configuration` as default.Frederick Muriuki Muriithi
2024-07-22gn-uploader: make app user owner of upload directory treeFrederick Muriuki Muriithi
2024-07-12Update configurations.Frederick Muriuki Muriithi
2024-07-12Make the container's /var/log directory available on hostFrederick Muriuki Muriithi
2024-07-12Indicate environment in container hostnamesFrederick Muriuki Muriithi
2024-07-12Add virtuoso to uploader.Frederick Muriuki Muriithi
2024-07-12Extend the genenetwork-service-type with the mcron indexer serviceFrederick Muriuki Muriithi
2024-07-12Make xapian directory writable inside container.Frederick Muriuki Muriithi
2024-07-12Generalise index-genenetwork cron gexpFrederick Muriuki Muriithi
2024-06-28Add tux04 slurm deployment.Arun Isaac
2024-06-28Make secrets dirs writable by relevant services.Frederick Muriuki Muriithi
2024-06-28Remove duplicated, and wrong settings.Frederick Muriuki Muriithi
2024-06-28Fix permissions: Only files are read-onlyFrederick Muriuki Muriithi
2024-06-28Make relevant services available to each service.Frederick Muriuki Muriithi