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Guix configuration for genenetwork machines
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2024-11-04
Run script to make non-human data public
Frederick Muriuki Muriithi
2024-11-04
Setup public sparql endpoint in container.
Frederick Muriuki Muriithi
2024-10-30
Explicitly name virtuoso's database files.
Frederick Muriuki Muriithi
2024-10-29
Do not share auth-db with genenetwork3 gunicorn app.
Frederick Muriuki Muriithi
2024-10-29
Specify path to LLM database in production.
Frederick Muriuki Muriithi
2024-10-29
Add llm-db-path field to genenetwork configuration..
Frederick Muriuki Muriithi
2024-10-29
Remove obsolete SSL key configuration.
Frederick Muriuki Muriithi
2024-10-29
Enable AI search in genenetwork service.
Frederick Muriuki Muriithi
2024-10-29
Add additional virtuso configuration.
Frederick Muriuki Muriithi
2024-10-24
Move production to tux04.
Frederick Muriuki Muriithi
2024-10-24
Add GN3 alias server to genenetwork service.
Frederick Muriuki Muriithi
2024-10-24
Add sanitizer for log-level configuration field.
Arun Isaac
2024-10-24
Make <gn-uploader-configuration> log-level a symbol.
Arun Isaac
2024-10-24
Re-format and improve indentation.
Arun Isaac
2024-10-24
Regularize <gn-uploader-configuration> getter functions.
Arun Isaac
2024-10-24
Add log-level field to genenetwork-configuration.
Frederick Muriuki Muriithi
2024-10-24
Set REAPER_COMMAND in gn3.conf.
Frederick Muriuki Muriithi
2024-10-24
Set GENOTYPE_FILES in gn3.conf.
Frederick Muriuki Muriithi
2024-10-18
Move directory permissions setting G-exp into separate variable.
Arun Isaac
2024-10-18
Provide UTF-8 locale so characters are encoded correctly.
Munyoki Kilyungi
2024-10-18
Explicitly set AUTH_SERVER_URL in gn3.conf.
Munyoki Kilyungi
2024-10-18
Upgrade slurm to 24.05.3.
Arun Isaac
2024-10-02
Update server root for gn-uploader.
Frederick Muriuki Muriithi
2024-10-02
Update path to genotype files.
Frederick Muriuki Muriithi
2024-09-12
Enable AI Search in GN2 CD.
Munyoki Kilyungi
2024-09-03
Configure slurm with --with-yaml.
Arun Isaac
2024-08-29
Install slurmrestd too.
Arun Isaac
2024-08-29
Add slurm deployment scripts for octopus.
Arun Isaac
2024-08-29
Use http-parser from Guix.
Arun Isaac
2024-08-13
Forward the scheme to the client to generate correct URIs.
Frederick Muriuki Muriithi
2024-08-13
Update docs
Frederick Muriuki Muriithi
2024-08-13
gn-uploader: Configure link to GN2 server.
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Add `AUTH_SERVER_URL` to the configurations.
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Update ENVVAR name
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Update configuration variable name.
Frederick Muriuki Muriithi
2024-08-06
Give access to read TTL from the /var/lib/virtuoso directory.
Frederick Muriuki Muriithi
2024-07-22
gn-uploader: use `gn-uploader-configuration` as default.
Frederick Muriuki Muriithi
2024-07-22
gn-uploader: make app user owner of upload directory tree
Frederick Muriuki Muriithi
2024-07-12
Update configurations.
Frederick Muriuki Muriithi
2024-07-12
Make the container's /var/log directory available on host
Frederick Muriuki Muriithi
2024-07-12
Indicate environment in container hostnames
Frederick Muriuki Muriithi
2024-07-12
Add virtuoso to uploader.
Frederick Muriuki Muriithi
2024-07-12
Extend the genenetwork-service-type with the mcron indexer service
Frederick Muriuki Muriithi
2024-07-12
Make xapian directory writable inside container.
Frederick Muriuki Muriithi
2024-07-12
Generalise index-genenetwork cron gexp
Frederick Muriuki Muriithi
2024-06-28
Add tux04 slurm deployment.
Arun Isaac
2024-06-28
Make secrets dirs writable by relevant services.
Frederick Muriuki Muriithi
2024-06-28
Remove duplicated, and wrong settings.
Frederick Muriuki Muriithi
2024-06-28
Fix permissions: Only files are read-only
Frederick Muriuki Muriithi
2024-06-28
Make relevant services available to each service.
Frederick Muriuki Muriithi
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