gn-machines - Guix configuration for genenetwork machines

Age	Commit message (Expand)	Author
2 days	DO NOT MERGE: temporarily change domain to gn2-fred.genenetwork.orgproduction-container	Frederick Muriuki Muriithi
2 days	Run script to make non-human data public	Frederick Muriuki Muriithi
2 days	Use forge-nginx-service-type to activate SSL certificates	Frederick Muriuki Muriithi
7 days	Specify the socket for MariaDB connections.	Frederick Muriuki Muriithi
9 days	Add AUTH_SERVER_URL setting to GN3HEAD main	Frederick Muriuki Muriithi
9 days	Expose the container logs.	Frederick Muriuki Muriithi
9 days	Bind a host directory to container's /tmp	Frederick Muriuki Muriithi
9 days	Unbind mysql director(y/ies)	Frederick Muriuki Muriithi
9 days	Use virtuoso's state directory as its data directory	Frederick Muriuki Muriithi
9 days	Explicitly set Virtuoso's Database and Transaction files.	Frederick Muriuki Muriithi
9 days	Pass log-level to gn-auth application	Frederick Muriuki Muriithi
9 days	Define REQUESTS_CA_BUNDLE envvar for python-requests	Frederick Muriuki Muriithi
10 days	Add cron job for running transform-genenetwork-database-gexp.	Munyoki Kilyungi
10 days	Delete %transform-genenetwork-database-export-directory.	Munyoki Kilyungi
10 days	Rename transform-genenetwork-database.	Munyoki Kilyungi
10 days	Make %virtuoso-data-dir writeable by laminar.	Munyoki Kilyungi
10 days	Refactor ttl and data-loading into Virtuoso in ci job.	Munyoki Kilyungi
2024-11-05	Bind host directory to the container's /tmp directory	Frederick Muriuki Muriithi
2024-10-30	Explicitly name virtuoso's database files.	Frederick Muriuki Muriithi
2024-10-29	Do not share auth-db with genenetwork3 gunicorn app.	Frederick Muriuki Muriithi
2024-10-29	Specify path to LLM database in production.	Frederick Muriuki Muriithi
2024-10-29	Add llm-db-path field to genenetwork configuration..	Frederick Muriuki Muriithi
2024-10-29	Remove obsolete SSL key configuration.	Frederick Muriuki Muriithi
2024-10-29	Enable AI search in genenetwork service.	Frederick Muriuki Muriithi
2024-10-29	Add additional virtuso configuration.	Frederick Muriuki Muriithi
2024-10-24	Move production to tux04.	Frederick Muriuki Muriithi
2024-10-24	Add GN3 alias server to genenetwork service.	Frederick Muriuki Muriithi
2024-10-24	Add sanitizer for log-level configuration field.	Arun Isaac
2024-10-24	Make <gn-uploader-configuration> log-level a symbol.	Arun Isaac
2024-10-24	Re-format and improve indentation.	Arun Isaac
2024-10-24	Regularize <gn-uploader-configuration> getter functions.	Arun Isaac
2024-10-24	Add log-level field to genenetwork-configuration.	Frederick Muriuki Muriithi
2024-10-24	Set REAPER_COMMAND in gn3.conf.	Frederick Muriuki Muriithi
2024-10-24	Set GENOTYPE_FILES in gn3.conf.	Frederick Muriuki Muriithi
2024-10-18	Move directory permissions setting G-exp into separate variable.	Arun Isaac
2024-10-18	Provide UTF-8 locale so characters are encoded correctly.	Munyoki Kilyungi
2024-10-18	Explicitly set AUTH_SERVER_URL in gn3.conf.	Munyoki Kilyungi
2024-10-18	Upgrade slurm to 24.05.3.	Arun Isaac
2024-10-02	Update server root for gn-uploader.	Frederick Muriuki Muriithi
2024-10-02	Update path to genotype files.	Frederick Muriuki Muriithi
2024-09-12	Enable AI Search in GN2 CD.	Munyoki Kilyungi
2024-09-03	Configure slurm with --with-yaml.	Arun Isaac
2024-08-29	Install slurmrestd too.	Arun Isaac
2024-08-29	Add slurm deployment scripts for octopus.	Arun Isaac
2024-08-29	Use http-parser from Guix.	Arun Isaac
2024-08-13	Forward the scheme to the client to generate correct URIs.	Frederick Muriuki Muriithi
2024-08-13	Update docs	Frederick Muriuki Muriithi
2024-08-13	gn-uploader: Configure link to GN2 server.	Frederick Muriuki Muriithi
2024-08-07	gn-uploader: Add `AUTH_SERVER_URL` to the configurations.	Frederick Muriuki Muriithi
2024-08-07	gn-uploader: Update ENVVAR name	Frederick Muriuki Muriithi