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AgeCommit message (Expand)Author
2023-07-27README: Remove references to penguin2.Arun Isaac
2023-07-27Revert "README: host names"Arun Isaac
2023-07-19Use tissue from guix-forge.Arun Isaac
2023-07-19Disable verbose build logs for guix-bioinformatics job.Arun Isaac
2023-07-19Use guix-channel-job-gexp for genenetwork3 tests.Arun Isaac
2023-07-19Add guix-bioinformatics CI job.Arun Isaac
2023-07-11README: host namesPjotr Prins
2023-07-11Revert "Disable tests"Munyoki Kilyungi
2023-07-10Add a troubleshooting subsection to READMEMunyoki Kilyungi
2023-07-10Revert "Fix genotype file path"Munyoki Kilyungi
2023-07-10Fix genotype file pathMunyoki Kilyungi
2023-07-10Disable testsMunyoki Kilyungi
2023-07-10Basic mail/opensmtpd service addedPjotr Prins
2023-06-26Add virtuoso allowed dirsMunyoki Kilyungi
2023-06-15Increase threshold for number-of-buffers and maximum-dirty-buffers.Munyoki Kilyungi
2023-06-15Add links to README.Munyoki Kilyungi
2023-06-08Share auth-db-path with genenetwork3-pola-wrapper.Frederick Muriuki Muriithi
2023-06-06Set AUTH_DB, not AUTH_DB_PATH.Frederick Muriuki Muriithi
2023-05-31Do not create xapian build directory.Arun Isaac
2023-05-31Use an absolute GN_SERVER_URL.Frederick Muriuki Muriithi
2023-05-31Add trailing slash to GN_SERVER_URL.Frederick Muriuki Muriithi
2023-05-22Document getting a shell into containerFrederick Muriuki Muriithi
2023-05-05Run migrations after tests and before restarting genenetwork3.Frederick Muriuki Muriithi
2023-04-12Run tissue on an IP socket.Arun Isaac
2023-04-12Disable libgit2 repository ownership validation.Arun Isaac
2023-04-11Use tissue package from Guix upstream.Arun Isaac
2023-04-11Provide MySQL URI to the xapian indexing script.Frederick Muriuki Muriithi
2023-02-09Share the mysqld socket directory into the container.Arun Isaac
2023-01-21GN3: pylint - Check more files and directoriesFrederick Muriuki Muriithi
2023-01-18Add data directory to genenetwork configuration.Arun Isaac
2023-01-18Move xapian directory.Arun Isaac
2023-01-08Clean up xapian build directory if previous build failed to.Arun Isaac
2023-01-05Create custom 502 error page for CD.Arun Isaac
2023-01-02Register containers as garbage collector roots.Arun Isaac
2022-12-22Build and install xapian index nightly.Arun Isaac
2022-12-22Separate out sudo into a variable.Arun Isaac
2022-12-22gn3: tests: Update the tests invocationFrederick Muriuki Muriithi
2022-12-10Move guix container state to /export2.Arun Isaac
2022-11-10Configure SPARQL endpoint of genenetwork3 server.Arun Isaac
2022-11-07Add public facing SPARQL container.Arun Isaac
2022-11-07Move CD virtuoso ports to 90*.Arun Isaac
2022-11-04Import GeneRIF by calling the unified dump script.Arun Isaac
2022-10-31Find GeneRIF data in root of export directory.Arun Isaac
2022-10-31Use guile-zlib in dump-genenetwork-database CI job.Arun Isaac
2022-10-31Ungexp gn2 and gn3 repositories correctly.Arun Isaac
2022-10-31Import (guix build utils) in after scripts of CI jobs.Arun Isaac
2022-10-30Import GeneRIF into RDF.Arun Isaac
2022-10-30Unite genenetwork2 and genenetwork3 development servers.Arun Isaac
2022-10-28Expose xapian index to genenetwork3 instead of genenetwork2.Arun Isaac
2022-10-25Link to gemtext documentation on securing virtuoso.Arun Isaac
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