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Diffstat (limited to 'qa-gn-deploy.sh')
| -rwxr-xr-x | qa-gn-deploy.sh | 63 |
1 files changed, 63 insertions, 0 deletions
diff --git a/qa-gn-deploy.sh b/qa-gn-deploy.sh new file mode 100755 index 0000000..42904b7 --- /dev/null +++ b/qa-gn-deploy.sh @@ -0,0 +1,63 @@ +#! /bin/bash -e + +# qa-deploy.sh --- Guix configuration for genenetwork machines LLM +# instance + +# Copyright © 2024 Munyoki Kilyungi <me@bonfacemunyoki.com> +# Copyright © 2024 Alexander Kabui <alexanderkabua@gmail.com> +# Copyright © 2024 John Nduli <rookie101@jnduli.co.ke> +# +# This file is part of genenetwork-machines. +# +# This program is free software; you can redistribute it and/or +# modify it under the terms of the GNU General Public License +# as published by the Free Software Foundation; either version 3 +# of the License, or (at your option) any later version. + +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. + +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. + +# Build and install qa container on tux02. + +SCRIPTARGS=("$@") + +MODULEARGS=() +if [ "${#SCRIPTARGS[@]}" -gt 0 ] +then + echo "===== Auxilliary module load paths =====" + for path in "${SCRIPTARGS[@]}" + do + echo "-L ${path}" + MODULEARGS+=("-L" "${path}") + done + echo "===== END: Auxilliary module load paths =====" +fi + +container_script=$(guix system container \ + "${MODULEARGS[@]}" \ + --network \ + --load-path=. \ + --verbosity=3 \ + --share=/export2/guix-containers/genenetwork/gn-qa/var/genenetwork=/var/genenetwork \ + --share=/export2/guix-containers/genenetwork/gn-qa/var/lib/acme=/var/lib/acme \ + --share=/export2/guix-containers/genenetwork/gn-qa/var/lib/mysql=/var/lib/mysql \ + --share=/export2/guix-containers/genenetwork/gn-qa/var/lib/virtuoso=/var/lib/virtuoso \ + --share=/export2/guix-containers/genenetwork/gn-qa/var/log=/var/log \ + --share=/export2/guix-containers/genenetwork/gn-qa/var/ssl=/var/ssl \ + --share=/export2/guix-containers/genenetwork/gn-qa/etc/genenetwork=/etc/genenetwork \ + --expose=/export/data/genenetwork-xapian/=/export/data/genenetwork-xapian \ + --share=/export/data/gn-qa/genenetwork-sqlite=/export/data/genenetwork-sqlite \ + --expose=/export/data/genenetwork/genotype_files=/export/data/genenetwork/genotype_files \ + --share=/export/data/gn-qa/genenetwork3=/export/data/genenetwork3 \ + --share=/export/data/gn-qa/gn-uploader \ + --share=/var/run/mysqld3307=/run/mysqld \ + qa-gn.scm) + +echo "${container_script}" +sudo ln --force --symbolic "${container_script}" /usr/local/bin/gn-qa-container +sudo ln --force --symbolic /usr/local/bin/gn-qa-container /var/guix/gcroots |