diff options
Diffstat (limited to 'genenetwork-development.scm')
| -rw-r--r-- | genenetwork-development.scm | 11 |
1 files changed, 10 insertions, 1 deletions
diff --git a/genenetwork-development.scm b/genenetwork-development.scm index 41bd095..5d71787 100644 --- a/genenetwork-development.scm +++ b/genenetwork-development.scm @@ -203,7 +203,6 @@ executed." (setenv "GENENETWORK_FILES" #$genotype-files) (setenv "HOME" "/tmp") (setenv "SQL_URI" "mysql://webqtlout:webqtlout@localhost/db_webqtl") - (setenv "GN2_SETTINGS" "/etc/genenetwork/conf/gn2_settings.py") (chdir "genenetwork2") (apply invoke '#$test-command)))))) @@ -461,6 +460,7 @@ server described by CONFIG, a <genenetwork-configuration> object." (setenv "NO_REDIS" "no-redis") (setenv "RUST_BACKTRACE" "1") (setenv "AUTH_SERVER_URL" "https://auth-cd.genenetwork.org/") + (setenv "GN2_SECRETS" "/etc/genenetwork/conf/gn2/secrets.py") ;; Start genenetwork2. (with-directory-excursion "genenetwork2" @@ -500,6 +500,7 @@ server described by CONFIG, a <genenetwork-configuration> object." "XAPIAN_DB_PATH=\"" xapian-db-path "\"\n" "AUTH_DB=\"" auth-db-path "\"\n")) (setenv "HOME" "/tmp") + (setenv "GN3_SECRETS" "/etc/genenetwork/conf/gn3/secrets.py") ;; Run genenetwork3. (with-directory-excursion "genenetwork3" (show-head-commit) @@ -569,6 +570,10 @@ described by CONFIG, a <genenetwork-configuration> object." (file-system-mapping (source "/run/mysqld") (target source) + (writable? #t)) + (file-system-mapping + (source "/etc/genenetwork/conf/gn2") + (target source) (writable? #t))) #:namespaces (delq 'net %namespaces)) "127.0.0.1" #$(number->string gn2-port)) @@ -598,6 +603,10 @@ described by CONFIG, a <genenetwork-configuration> object." (file-system-mapping (source xapian-db-path) (target source)) + (file-system-mapping + (source "/etc/genenetwork/conf/gn3") + (target source) + (writable? #t)) (file-system-mapping (source auth-db-path) (target source) |