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Diffstat (limited to 'genenetwork-development-deploy.sh')
| -rwxr-xr-x | genenetwork-development-deploy.sh | 36 |
1 files changed, 36 insertions, 0 deletions
diff --git a/genenetwork-development-deploy.sh b/genenetwork-development-deploy.sh new file mode 100755 index 0000000..8d9d1ab --- /dev/null +++ b/genenetwork-development-deploy.sh @@ -0,0 +1,36 @@ +#! /bin/sh -e + +# genenetwork-machines --- Guix configuration for genenetwork machines +# Copyright © 2022 Arun Isaac <arunisaac@systemreboot.net> +# +# This file is part of genenetwork-machines. +# +# genenetwork-machines is free software: you can redistribute it +# and/or modify it under the terms of the GNU General Public License +# as published by the Free Software Foundation, either version 3 of +# the License, or (at your option) any later version. +# +# genenetwork-machines is distributed in the hope that it will be +# useful, but WITHOUT ANY WARRANTY; without even the implied warranty +# of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with genenetwork-machines. If not, see +# <https://www.gnu.org/licenses/>. + +# Build and install genenetwork development container on penguin2. + +container_script=$(guix system container --network \ + --verbosity=3 \ + --load-path=. \ + --share=/var/guix/daemon-socket=/var/host-guix/daemon-socket \ + --share=/var/guix-containers/genenetwork-development/var/lib/laminar=/var/lib/laminar \ + --expose=/export/data/genenetwork/genotype_files \ + --share=/export/genenetwork-database-dump \ + --share=/var/run/mysqld/mysqld.sock=/run/mysqld/mysqld.sock \ + --share=/var/guix-containers/genenetwork-development/srv/http=/srv/http \ + genenetwork-development.scm) + +echo $container_script +sudo ln --force --symbolic $container_script /usr/local/bin/genenetwork-development-container |