diff options
| -rw-r--r-- | genenetwork-development.scm | 24 |
1 files changed, 18 insertions, 6 deletions
diff --git a/genenetwork-development.scm b/genenetwork-development.scm index 852711f..2b7ea79 100644 --- a/genenetwork-development.scm +++ b/genenetwork-development.scm @@ -204,24 +204,36 @@ to be executed." (display (make-string 50 #\=)) (newline) (force-output)) - + + (define (show-head-commit) + (hline) + (invoke "git" "log" "--max-count" "1") + (hline)) + + (invoke "git" "clone" "--depth" "1" + "https://github.com/genenetwork/genenetwork3") + (with-directory-excursion "genenetwork3" + (show-head-commit)) (invoke "git" "clone" "--depth" "1" "--branch" #$(forge-project-repository-branch project) - #$(forge-project-repository project) - ".") - (hline) - (invoke "git" "log" "--max-count" "1") - (hline) + #$(forge-project-repository project)) + (with-directory-excursion "genenetwork2" + (show-head-commit)) (setenv "SERVER_PORT" "8080") + ;; Use a profile with all dependencies except genenetwork3. (setenv "GN2_PROFILE" #$(profile (content (package->development-manifest genenetwork2)) (allow-collisions? #t))) + ;; Set GN3_PYTHONPATH to the latest genenetwork3. + (setenv "GN3_PYTHONPATH" + (string-append (getcwd) "/genenetwork3")) (setenv "GN_PROXY_URL" "http://genenetwork.org/gn3-proxy/") (setenv "GN3_LOCAL_URL" (string-append "http://localhost:" (number->string #$%genenetwork3-port))) (setenv "GENENETWORK_FILES" #$%genotype-files) (setenv "HOME" "/tmp") (setenv "SQL_URI" "mysql://webqtlout:webqtlout@localhost/db_webqtl") + (chdir "genenetwork2") (apply invoke '#$test-command))))) (define (genenetwork2-project config) |