Add CI/CD definitions for gn-auth

1 files changed, 37 insertions, 0 deletions

diff --git a/genenetwork/development-helper.scm b/genenetwork/development-helper.scm
index 81bfc3b..627a80a 100644
--- a/genenetwork/development-helper.scm
+++ b/genenetwork/development-helper.scm
@@ -101,3 +101,40 @@ with genenetwork3 dependencies."
                       (find-files "." shell-script?))
             (invoke "pylint" "main.py" "setup.py" "wsgi.py" "setup_commands" "tests" "gn3" "scripts" "sheepdog"))
           (mkdir-p #$output)))))
+
+(define (genenetwork-lint-gexp source-repo-checkout profile files-and-modules)
+  "Return a G-expression that runs GeneNetwork3 lint tests in PROFILE
+with SOURCE-REPO-CHECKOUT as the current directory. SOURCE-REPO-CHECKOUT
+is a checkout of the genenetwork3 source code. PROFILE is a profile
+with genenetwork3 dependencies."
+  (with-imported-modules '((guix build utils))
+    (with-profile profile
+      #~(begin
+          (use-modules (rnrs exceptions)
+                       (srfi srfi-26)
+                       (ice-9 rdelim)
+                       (guix build utils))
+
+          (define (shell-script? filename stat-obj)
+            (and (eq? (stat:type stat-obj) 'regular)
+                 (call-with-input-file filename
+                   (lambda (port)
+                     (let ((first-line (read-line port)))
+                       (and (not (eof-object? first-line))
+                            (> (string-length first-line) 2)
+                            (string=? (string-take first-line 2) "#!")
+                            (or (string-contains first-line "/bin/sh")
+                                (string-contains first-line "/bin/bash"))))))))
+
+          (chdir #$source-repo-checkout)
+          (guard (condition ((invoke-error? condition)
+                             (format (current-error-port)
+                                     "`~a~{ ~a~}' failed with exit status ~a~%"
+                                     (invoke-error-program condition)
+                                     (invoke-error-arguments condition)
+                                     (invoke-error-exit-status condition))
+                             (exit #f)))
+            (for-each (cut invoke "shellcheck" <>)
+                      (find-files "." shell-script?))
+            (invoke "pylint" #$@files-and-modules))
+          (mkdir-p #$output)))))